Publications 24 Datasets 392.5k Experiments 4.7k

Explore

Filters: 1 ✕ 1 ✕ bulk rna-seq ✕ clear all

24 matching publication(s)

Publication	Journal	Year	Score	Verdict
Under the Shadow: Old-biased Genes Are Subject to Weak Purifying Selection at Both the Tissue- and Cell Type-Specific Levels. PMID 41092135	Genome Biol Evol	2025	93	L1 93/100
An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying SFPQ-TFE3 driven translocation RCC. PMID 40463960	iScience	2025	88	L1 88/100
Synthesis of transcriptomic studies reveals a core response to heat stress in abalone (genus Haliotis). PMID 40361012	BMC Genomics	2025	80	L1 80/100
Covalent binding of thioredoxin to TXNIP is required for diet-induced insulin resistance in the liver. PMID 40345590	J Biol Chem	2025	87	L1 87/100
Transcriptomic and physiological analysis of atractylodes chinensis in response to drought stress reveals the putative genes related to sesquiterpenoid biosynth PMID 38317086	BMC Plant Biol	2024	78	L1 78/100
Single-cell transcriptomics and chromatin accessibility profiling elucidate the kidney-protective mechanism of mineralocorticoid receptor antagonists. PMID 37906287	J Clin Invest	2024	95	L1 95/100
iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type-Specific Markers of Immune-Cell Infiltr PMID 37023414	Cancer Immunol Res	2023	94	L1 94/100
Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart. PMID 37012284	Sci Rep	2023	90	L2 90/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity. PMID 36928603	Nat Genet	2023	80	L1 80/100
A temporal classifier predicts histopathology state and parses acute-chronic phasing in inflammatory bowel disease patients. PMID 36694043	Commun Biol	2023	83	L1 83/100
Global and precise identification of functional miRNA targets in mESCs by integrative analysis. PMID 35899551	EMBO Rep	2022	93	L1 93/100
Analysis of the Hypoxic Response in a Mouse Cortical Collecting Duct-Derived Cell Line Suggests That Esrra Is Partially Involved in Hif1α-Mediated Hypoxia-Induc PMID 35806266	Int J Mol Sci	2022	76	L1 76/100
Extensive transgressive gene expression in testis but not ovary in the homoploid hybrid Italian sparrow. PMID 35726533	Mol Ecol	2022	93	L1 93/100
TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes. PMID 35580127	PLoS Genet	2022	95	L2 95/100
Betacoronavirus-specific alternate splicing. PMID 35074468	Genomics	2022	100	L1 100/100
Itaconate and derivatives reduce interferon responses and inflammation in influenza A virus infection. PMID 35025971	PLoS Pathog	2022	95	L1 95/100
Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development. PMID 34643182	Elife	2021	84	L1 84/100
A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex. PMID 34253796	Sci Rep	2021	84	84/100
Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway PMID 34095875	Cell Rep Med	2021	88	L1 88/100
In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age. PMID 32898168	PLoS Biol	2020	89	L1 89/100
Scalable Prediction of Acute Myeloid Leukemia Using High-Dimensional Machine Learning and Blood Transcriptomics. PMID 31918046	iScience	2019	96	L1 96/100
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations. PMID 31799603	Nucleic Acids Res	2020	89	L1 89/100
Eye in a Disk: eyeIntegration Human Pan-Eye and Body Transcriptome Database Version 1.0. PMID 31343654	Invest Ophthalmol Vis Sci	2019	94	L1 94/100
Easy and efficient ensemble gene set testing with EGSEA. PMID 29333246	F1000Res	2017	97	L1 97/100