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114 matching publication(s)
Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development.
PMID 34643182 · Elife · 2021
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84/100
miRbiom: Machine-learning on Bayesian causal nets of RBP-miRNA interactions successfully predicts miRNA profiles.
PMID 34637468 · PLoS One · 2021
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100/100
Antigen and checkpoint receptor engagement recalibrates T cell receptor signal strength.⚑
PMID 34534438 · Immunity · 2021
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37/100
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DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data.
PMID 34261540 · Genome Med · 2021
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84/100
Profiling chromatin accessibility responses in human neutrophils with sensitive pathogen detection.⚑
PMID 34145026 · Life Sci Alliance · 2021
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54/100
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Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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88/100
Integration of Dual Stress Transcriptomes and Major QTLs from a Pair of Genotypes Contrasting for Drought and Chronic Nitrogen Starvation Identifies Key Stress⚑
PMID 34089405 · Rice (N Y) · 2021
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43/100
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eVITTA: a web-based visualization and inference toolbox for transcriptome analysis.
PMID 34019643 · Nucleic Acids Res · 2021
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82/100
Co-regulation and function of FOXM1/RHNO1 bidirectional genes in cancer.
PMID 33890574 · Elife · 2021
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76/100
Coding and non-coding roles of MOCCI (C15ORF48) coordinate to regulate host inflammation and immunity.
PMID 33837217 · Nat Commun · 2021
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68/100
Generic injuries are sufficient to induce ectopic Wnt organizers in Hydra.
PMID 33779545 · Elife · 2021
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100/100
GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses.
PMID 33758032 · mSystems · 2021
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70/100
Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer.
PMID 33729159 · Elife · 2021
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94/100
Gene co-expression network analysis in human spinal cord highlights mechanisms underlying amyotrophic lateral sclerosis susceptibility.
PMID 33707641 · Sci Rep · 2021
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100/100
Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression.
PMID 33722289 · Genome Biol · 2021
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66/100
Epigenome screening highlights that JMJD6 confers an epigenetic vulnerability and mediates sunitinib sensitivity in renal cell carcinoma.
PMID 33634984 · Clin Transl Med · 2021
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85/100
Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials.
PMID 33558569 · Sci Data · 2021
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94/100
Indoleamine 2, 3-Dioxygenase 1 and CD8 Expression Profiling Revealed an Immunological Subtype of Colon Cancer With a Poor Prognosis.⚑
PMID 33425745 · Front Oncol · 2020
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48/100
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Prediction of Alzheimer's disease-specific phospholipase c gamma-1 SNV by deep learning-based approach for high-throughput screening.
PMID 33397809 · Proc Natl Acad Sci U S A · 2021
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48/100
Systematic clustering algorithm for chromatin accessibility data and its application to hematopoietic cells.
PMID 33253153 · PLoS Comput Biol · 2020
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90/100
Regulatory and evolutionary adaptation of yeast to acute lethal ethanol stress.
PMID 33170850 · PLoS One · 2020
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68/100
Genomic regions and signaling pathways associated with indicator traits for feed efficiency in juvenile Atlantic salmon (Salmo salar).
PMID 33158415 · Genet Sel Evol · 2020
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85/100
Enhancer Reprogramming Confers Dependence on Glycolysis and IGF Signaling in KMT2D Mutant Melanoma.
PMID 33086062 · Cell Rep · 2020
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59/100
Evaluating Distribution and Prognostic Value of New Tumor-Infiltrating Lymphocytes in HCC Based on a scRNA-Seq Study With CIBERSORTx.
PMID 33043022 · Front Med (Lausanne) · 2020
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78/100
Trem2 promotes anti-inflammatory responses in microglia and is suppressed under pro-inflammatory conditions.
PMID 32959884 · Hum Mol Genet · 2020
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67/100
Synergism between IL7R and CXCR4 drives BCR-ABL induced transformation in Philadelphia chromosome-positive acute lymphoblastic leukemia.
PMID 32581241 · Nat Commun · 2020
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92/100
An Erg-driven transcriptional program controls B cell lymphopoiesis.
PMID 32541654 · Nat Commun · 2020
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81/100
Unveiling prognostics biomarkers of tyrosine metabolism reprogramming in liver cancer by cross-platform gene expression analyses.⚑
PMID 32542016 · PLoS One · 2020
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51/100
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miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems.
PMID 32374865 · Nucleic Acids Res · 2020
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61/100
STAT3-dependent analysis reveals PDK4 as independent predictor of recurrence in prostate cancer.
PMID 32323921 · Mol Syst Biol · 2020
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66/100
Integrative network modeling reveals mechanisms underlying T cell exhaustion.
PMID 32024856 · Sci Rep · 2020
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59/100
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community.⚑
PMID 32019831 · mSystems · 2020
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57/100
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Transcriptomic profiling of skeletal muscle adaptations to exercise and inactivity.
PMID 31980607 · Nat Commun · 2020
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52/100
From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy.
PMID 31830909 · BMC Genomics · 2019
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88/100
PDGFRA defines the mesenchymal stem cell Kaposi's sarcoma progenitors by enabling KSHV oncogenesis in an angiogenic environment.
PMID 31881074 · PLoS Pathog · 2019
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85/100
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations.
PMID 31799603 · Nucleic Acids Res · 2020
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89/100
Dynamic reversal of random X-Chromosome inactivation during iPSC reprogramming.
PMID 31515287 · Genome Res · 2019
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75/100
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection.
PMID 31533612 · BMC Bioinformatics · 2019
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69/100
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.
PMID 31492853 · Nat Commun · 2019
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77/100
Eye in a Disk: eyeIntegration Human Pan-Eye and Body Transcriptome Database Version 1.0.
PMID 31343654 · Invest Ophthalmol Vis Sci · 2019
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94/100
Wx: a neural network-based feature selection algorithm for transcriptomic data.
PMID 31324856 · Sci Rep · 2019
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50/100
Core transcriptional signatures of phase change in the migratory locust.⚑
PMID 31292921 · Protein Cell · 2019
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60/100
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GREIN: An Interactive Web Platform for Re-analyzing GEO RNA-seq Data.
PMID 31110304 · Sci Rep · 2019
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73/100
sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression.
PMID 31114926 · Nucleic Acids Res · 2019
not yet assessed
Translation affects mRNA stability in a codon-dependent manner in human cells.
PMID 31012849 · Elife · 2019
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87/100
DNA demethylation is associated with malignant progression of lower-grade gliomas.
PMID 30760837 · Sci Rep · 2019
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No data access
Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor.
PMID 30576656 · Mol Cell · 2018
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No data access
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes.⚑
PMID 30503143 · Cell Stem Cell · 2018
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30/100
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Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus.
PMID 30303955 · PLoS Negl Trop Dis · 2018
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94/100
Firefly genomes illuminate parallel origins of bioluminescence in beetles.
PMID 30324905 · Elife · 2018
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93/100