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89 matching publication(s)
RNA-sequence analysis of primary alveolar macrophages after in vitro infection with porcine reproductive and respiratory syndrome virus strains of differing vir⚑
PMID 24643046 · PLoS One · 2014
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Minimal metabolic pathway structure is consistent with associated biomolecular interactions.
PMID 24987116 · Mol Syst Biol · 2014
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30/100
Rbfox2 controls autoregulation in RNA-binding protein networks.⚑
PMID 24637117 · Genes Dev · 2014
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48/100
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Transcriptome profiling of radish (Raphanus sativus L.) root and identification of genes involved in response to Lead (Pb) stress with next generation sequencin⚑
PMID 23840502 · PLoS One · 2013
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Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs.⚑
PMID 23536903 · PLoS One · 2013
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45/100
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The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment.⚑
PMID 25506420 · F1000Res · 2013
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42/100
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StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics.⚑
PMID 24627795 · F1000Res · 2013
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43/100
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Aberration in DNA methylation in B-cell lymphomas has a complex origin and increases with disease severity.
PMID 23326238 · PLoS Genet · 2013
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49/100
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer.
PMID 24221193 · Genome Res · 2013
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Compression of structured high-throughput sequencing data.⚑
PMID 24260313 · PLoS One · 2013
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43/100
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Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic.⚑
PMID 23516341 · PLoS Comput Biol · 2013
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44/100
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RNA-Seq transcriptome profiling of upland cotton (Gossypium hirsutum L.) root tissue under water-deficit stress.⚑
PMID 24324815 · PLoS One · 2013
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38/100
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oPOSSUM-3: advanced analysis of regulatory motif over-representation across genes or ChIP-Seq datasets.⚑
PMID 22973536 · G3 (Bethesda) · 2012
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49/100
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Integration of Transcriptomics With Interpretable Artificial Intelligence for Identifying Molecular Signatures of Physiological Stress in Sleep Deprivation.
PMID 42216239 · J Cell Mol Med · 2026
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49/100
CD74 deficiency protects against doxorubicin cardiotoxicity through RRM2-mediated regulation of ferroptosis.⚑
PMID 42180553 · Acta Pharm Sin B · 2026
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29/100
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LRP1 as a potential diagnostic and immunomodulatory target in endometriosis: evidence from multi-omics and single-cell analyses.
PMID 42064072 · Front Immunol · 2026
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Machine learning-based DNA microarray analysis for disease detection using the MICRO-AI framework.⚑
PMID 41925147 · Sci Prog · 2026
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22/100
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MiGPC: a comprehensive catalog of enzybiotics from environmental metagenomes.⚑
PMID 41888223 · Sci Rep · 2026
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24/100
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FOXM1 inhibitor, RCM‑1, enhances venetoclax mediated apoptosis through downregulation of ATP2B4 in rhabdomyosarcoma.⚑
PMID 41789627 · Int J Oncol · 2026
10/100
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Unveiling the immunometabolic landscape of colorectal cancer through PANoptosis-related gene expression.⚑
PMID 41601652 · Front Immunol · 2026
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41/100
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5-HT reuptake blockade induces pyroptosis in BRAFV600E-mutated melanomas via remodeling histone serotonylation.⚑
PMID 41494533 · Cell Rep Med · 2026
40/100
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Integrated analysis of post-transcriptional regulations reveals insights into acute myeloid leukemia.⚑
PMID 41407883 · Commun Biol · 2025
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MUTACLASH: identifying functional small RNA target sites using crosslinking-induced mutations.
PMID 41330639 · RNA · 2026
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Gli1-expressing stromal cells are highly reparative precursors of long-lived chondroprogenitors in the fetal murine limb.⚑
PMID 41253754 · Nat Commun · 2025
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10/100
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A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia Beetles.
PMID 41022899 · Sci Data · 2025
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Tracing truth: dynamic temporal networks for multi-modal fake news detection.⚑
PMID 40989433 · PeerJ Comput Sci · 2025
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33/100
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CanCellCap: robust cancer cell capture across tissue types on single-cell RNA-seq data by multi-domain learning.
PMID 40739511 · BMC Biol · 2025
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Improved epigenetic age prediction models by combining sex chromosome and autosomal markers.
PMID 40665390 · Epigenetics Chromatin · 2025
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Integrative transcriptomics and single-cell transcriptomics analyses reveal potential biomarkers and mechanisms of action in papillary thyroid carcinoma.
PMID 40520228 · Front Genet · 2025
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49/100
To Explore the Key Subgroup and Their Immune Microenvironment During the Formation of Coronary Plaque With scRNA-seq.⚑
PMID 40454289 · Cardiol Res Pract · 2025
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33/100
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Dynamic Gene Attention Focus (DyGAF): Enhancing Biomarker Identification Through Dual-Model Attention Networks.⚑
PMID 40160891 · Bioinform Biol Insights · 2025
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44/100
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Partial correlation network analysis identifies coordinated gene expression within a regional cluster of COPD genome-wide association signals.⚑
PMID 39418301 · PLoS Comput Biol · 2024
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23/100
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Screening of Diagnostic Biomarkers and Immune Infiltration Characteristics Linking Rheumatoid Arthritis and Rosacea Based on Bioinformatics Analysis.⚑
PMID 39104909 · J Inflamm Res · 2024
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48/100
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Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas.
PMID 39152432 · J Transl Med · 2024
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Machine learning developed an intratumor heterogeneity signature for predicting clinical outcome and immunotherapy benefit in bladder cancer.⚑
PMID 39100839 · Transl Androl Urol · 2024
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DeepGSEA: explainable deep gene set enrichment analysis for single-cell transcriptomic data.
PMID 38950178 · Bioinformatics · 2024
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40/100
Exploring the role and mechanism of Astragalus membranaceus and radix paeoniae rubra in idiopathic pulmonary fibrosis through network pharmacology and experimen⚑
PMID 37666859 · Sci Rep · 2023
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20/100
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PD-1 blockade potentiates neoadjuvant chemotherapy in NSCLC via increasing CD127+ and KLRG1+ CD8 T cells.
PMID 37231145 · NPJ Precis Oncol · 2023
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On the holobiont 'predictome' of immunocompetence in pigs.⚑
PMID 37127575 · Genet Sel Evol · 2023
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Genomic capacities for Reactive Oxygen Species metabolism across marine phytoplankton.⚑
PMID 37098087 · PLoS One · 2023
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38/100
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Orthogonal cytokine engineering enables novel synthetic effector states escaping canonical exhaustion in tumor-rejecting CD8+ T cells.
PMID 37081150 · Nat Immunol · 2023
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Insights into the differentiation and adaptation within Circaeasteraceae from Circaeaster agrestis genome sequencing and resequencing.⚑
PMID 36895650 · iScience · 2023
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49/100
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Gene Regulatory Interactions at Lamina-Associated Domains.⚑
PMID 36833261 · Genes (Basel) · 2023
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Integrating transcriptomic datasets across neurological disease identifies unique myeloid subpopulations driving disease-specific signatures.⚑
PMID 36527260 · Glia · 2022
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TransFlow: a Snakemake workflow for transmission analysis of Mycobacterium tuberculosis whole-genome sequencing data.⚑
PMID 36469333 · Bioinformatics · 2023
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43/100
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RNA Editing Alterations Define Disease Manifestations in the Progression of Experimental Autoimmune Encephalomyelitis (EAE).⚑
PMID 36429012 · Cells · 2022
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37/100
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KAGE: fast alignment-free graph-based genotyping of SNPs and short indels.⚑
PMID 36195962 · Genome Biol · 2022
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42/100
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Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma.⚑
PMID 36015199 · Pharmaceutics · 2022
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De novo transcriptome assembly and comprehensive assessment provide insight into fruiting body formation of Sparassis latifolia.⚑
PMID 35773379 · Sci Rep · 2022
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