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38 matching publication(s)

Publication	Journal	Year	Score	Verdict
An individualized causal framework for learning intercellular communication networks that define microenvironments of individual tumors. PMID 36548438	PLoS Comput Biol	2022	67	L1 67/100
Autoencoder Networks Decipher the Association between Lung Cancer and Alzheimer's Disease. PMID 36518809	Comput Intell Neurosci	2022	74	L1 74/100
Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential. PMID 36450752	Nat Commun	2022	70	L1 70/100
Spatial transcriptomics demonstrates the role of CD4 T cells in effector CD8 T cell differentiation during chronic viral infection. PMID 36450262	Cell Rep	2022	50	L1 50/100
Comprehensive Transcriptome Analysis Reveals Genome-Wide Changes Associated with Endoplasmic Reticulum (ER) Stress in Potato (Solanum tuberosum L.). PMID 36430273	Int J Mol Sci	2022	62	L1 62/100
N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in y ⚑ PMID 36422864	Elife	2022	55	L1 55/100 ⚑
CHD7 regulates otic lineage specification and hair cell differentiation in human inner ear organoids. PMID 36396635	Nat Commun	2022	50	L1 50/100
Genetic architecture of natural variation of cardiac performance from flies to humans. PMID 36383075	Elife	2022	74	L1 74/100
Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model. PMID 36321803	Elife	2022	72	L1 72/100
Stromal androgen signaling acts as tumor niches to drive prostatic basal epithelial progenitor-initiated oncogenesis. ⚑ PMID 36323713	Nat Commun	2022	63	L1 63/100 ⚑
spliceJAC: transition genes and state-specific gene regulation from single-cell transcriptome data. ⚑ PMID 36321549	Mol Syst Biol	2022	53	L1 53/100 ⚑
CASK loss of function differentially regulates neuronal maturation and synaptic function in human induced cortical excitatory neurons. PMID 36262316	iScience	2022	62	L1 62/100
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms. PMID 36262335	F1000Res	2022	59	L1 59/100
Effects of replication domains on genome-wide UV-induced DNA damage and repair. PMID 36155646	PLoS Genet	2022	74	74/100
Estimating biodiversity across the tree of life on Mount Everest's southern flank with environmental DNA. PMID 36148432	iScience	2022	65	L1 65/100
A feed-forward pathway drives LRRK2 kinase membrane recruitment and activation. PMID 36149401	Elife	2022	50	L1 50/100
Transcriptomics, regulatory syntax, and enhancer identification in mesoderm-induced ESCs at single-cell resolution. ⚑ PMID 35977485	Cell Rep	2022	63	L1 63/100 ⚑
Dioxin-elicited decrease in cobalamin redirects propionyl-CoA metabolism to the β-oxidation-like pathway resulting in acrylyl-CoA conjugate buildup. PMID 35931118	J Biol Chem	2022	73	L1 73/100
Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake. ⚑ PMID 35902092	Gigascience	2022	61	L1 61/100 ⚑
Gene module regulation in dilated cardiomyopathy and the role of Na/K-ATPase. ⚑ PMID 35901050	PLoS One	2022	55	L1 55/100 ⚑
Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition. ⚑ PMID 35819852	J Clin Invest	2022	68	L1 68/100 ⚑
Apoptotic brown adipocytes enhance energy expenditure via extracellular inosine PMID 35790189	—	2022	57	L1 57/100
RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12. ⚑ PMID 35584008	Microb Genom	2022	61	L1 61/100 ⚑
Multi-scale integrative analyses identify THBS2+ cancer-associated fibroblasts as a key orchestrator promoting aggressiveness in early-stage lung ade PMID 35547750	Theranostics	2022	68	L1 68/100
GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. PMID 35501696	BMC Bioinformatics	2022	67	L1 67/100
Environment and Co-occurring Native Mussel Species, but Not Host Genetics, Impact the Microbiome of a Freshwater Invasive Species (Corbicula fluminea). PMID 35444631	Front Microbiol	2022	55	L1 55/100
Harnessing secretory pathway differences between HEK293 and CHO to rescue production of difficult to express proteins. PMID 35301123	Metab Eng	2022	71	L1 71/100
Arabidopsis RBV is a conserved WD40 repeat protein that promotes microRNA biogenesis and ARGONAUTE1 loading. PMID 35260568	Nat Commun	2022	55	L1 55/100
Identification of new ETV6 modulators through a high-throughput functional screening. PMID 35198911	iScience	2022	68	68/100
Profiling Selective Packaging of Host RNA and Viral RNA Modification in SARS-CoV-2 Viral Preparations. PMID 35186917	Front Cell Dev Biol	2022	56	L1 56/100
TC-hunter: identification of the insertion site of a transgenic gene within the host genome. PMID 35184734	BMC Genomics	2022	69	L1 69/100
Downstream high-speed plasma jet generation as a direct consequence of shock reformation. PMID 35105885	Nat Commun	2022	67	L1 67/100
GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring. PMID 35087491	Front Microbiol	2022	50	L1 50/100
Comprehensive characterization of the antibody responses to SARS-CoV-2 Spike protein finds additional vaccine-induced epitopes beyond those for mild infection. ⚑ PMID 35072628	Elife	2022	57	L1 57/100 ⚑
Comparative Genomics of Borderline Oxacillin-Resistant Staphylococcus aureus Detected during a Pseudo-outbreak of Methicillin-Resistant S. aureus in a Neonatal PMID 35038924	mBio	2022	63	L1 63/100
Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients. PMID 35012625	Genome Biol	2022	68	L1 68/100
Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq. PMID 34875090	Nucleic Acids Res	2022	56	L1 56/100
A transcriptomic atlas of Aedes aegypti reveals detailed functional organization of major body parts and gut regional specializations in sugar-fed and bl PMID 35471187	Elife	2022	73	L1 73/100