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87 matching publication(s)

Publication	Journal	Year	Score	Verdict
High-throughput sequencing SELEX for the determination of DNA-binding protein specificities in vitro. PMID 35776646	STAR Protoc	2022	65	65/100
A hybrid empirical and parametric approach for managing ecosystem complexity: Water quality in Lake Geneva under nonstationary futures. PMID 35733249	Proc Natl Acad Sci U S A	2022	69	L1 69/100
Genetic polyploid phasing from low-depth progeny samples. PMID 35692633	iScience	2022	73	73/100
Implementing the reuse of public DIA proteomics datasets: from the PRIDE database to Expression Atlas. PMID 35701420	Sci Data	2022	50	L1 50/100
GeMI: interactive interface for transformer-based Genomic Metadata Integration. PMID 35657113	Database (Oxford)	2022	64	L1 64/100
RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12. ⚑ PMID 35584008	Microb Genom	2022	61	L1 61/100 ⚑
Multi-scale integrative analyses identify THBS2+ cancer-associated fibroblasts as a key orchestrator promoting aggressiveness in early-stage lung ade PMID 35547750	Theranostics	2022	68	L1 68/100
GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. PMID 35501696	BMC Bioinformatics	2022	67	L1 67/100
Identifying Molecular Subtypes and 6-Gene Prognostic Signature Based on Hypoxia for Optimizing Targeted Therapies in Non-Small Cell Lung Cancer. PMID 35509605	Int J Gen Med	2022	59	L1 59/100
Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF. PMID 35508485	Nat Commun	2022	55	L1 55/100
Deconvolution of the hematopoietic stem cell microenvironment reveals a high degree of specialization and conservation. PMID 35494238	iScience	2022	60	L1 60/100
Satellitome Analysis and Transposable Elements Comparison in Geographically Distant Populations of Spodoptera frugiperda. PMID 35455012	Life (Basel)	2022	67	L1 67/100
Blood Transcriptome Analysis of Septic Patients Reveals a Long Non-Coding Alu-RNA in the Complement C5a Receptor 1 Gene. PMID 35447887	Noncoding RNA	2022	64	L1 64/100
Environment and Co-occurring Native Mussel Species, but Not Host Genetics, Impact the Microbiome of a Freshwater Invasive Species (Corbicula fluminea). PMID 35444631	Front Microbiol	2022	55	L1 55/100
Molecular Biomarker of Drug Resistance Developed From Patient-Derived Organoids Predicts Survival of Colorectal Cancer Patients. PMID 35425715	Front Oncol	2022	53	L1 53/100
The HCV Envelope Glycoprotein Down-Modulates NF-κB Signalling and Associates With Stimulation of the Host Endoplasmic Reticulum Stress Pathway. PMID 35371105	Front Immunol	2022	50	L1 50/100
Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses. PMID 35349333	Proc Natl Acad Sci U S A	2022	66	L1 66/100
Prospects of telomere-to-telomere assembly in barley: Analysis of sequence gaps in the MorexV3 reference genome. PMID 35338551	Plant Biotechnol J	2022	71	71/100
MEDUSA: A Pipeline for Sensitive Taxonomic Classification and Flexible Functional Annotation of Metagenomic Shotgun Sequences. PMID 35330728	Front Genet	2022	50	L1 50/100
Harnessing secretory pathway differences between HEK293 and CHO to rescue production of difficult to express proteins. PMID 35301123	Metab Eng	2022	71	L1 71/100
Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L. ⚑ PMID 35328546	Int J Mol Sci	2022	55	L1 55/100 ⚑
Mucospheres produced by a mixotrophic protist impact ocean carbon cycling. PMID 35288549	Nat Commun	2022	58	L2 58/100
Arabidopsis RBV is a conserved WD40 repeat protein that promotes microRNA biogenesis and ARGONAUTE1 loading. PMID 35260568	Nat Commun	2022	55	L1 55/100
Identification of new ETV6 modulators through a high-throughput functional screening. PMID 35198911	iScience	2022	68	68/100
Comparison between short-term stress and long-term adaptive responses reveal common paths to molecular adaptation. PMID 35243257	iScience	2022	59	L1 59/100
Profiling Selective Packaging of Host RNA and Viral RNA Modification in SARS-CoV-2 Viral Preparations. PMID 35186917	Front Cell Dev Biol	2022	56	L1 56/100
TC-hunter: identification of the insertion site of a transgenic gene within the host genome. PMID 35184734	BMC Genomics	2022	69	L1 69/100
epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing. ⚑ PMID 35178872	Mol Ecol Resour	2022	52	52/100 ⚑
Downstream high-speed plasma jet generation as a direct consequence of shock reformation. PMID 35105885	Nat Commun	2022	67	L1 67/100
Environmental selection overturns the decay relationship of soil prokaryotic community over geographic distance across grassland biotas. ⚑ PMID 35073255	Elife	2022	57	L1 57/100 ⚑
GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring. PMID 35087491	Front Microbiol	2022	50	L1 50/100
Comprehensive characterization of the antibody responses to SARS-CoV-2 Spike protein finds additional vaccine-induced epitopes beyond those for mild infection. ⚑ PMID 35072628	Elife	2022	57	L1 57/100 ⚑
Comparative Genomics of Borderline Oxacillin-Resistant Staphylococcus aureus Detected during a Pseudo-outbreak of Methicillin-Resistant S. aureus in a Neonatal PMID 35038924	mBio	2022	63	L1 63/100
Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients. PMID 35012625	Genome Biol	2022	68	L1 68/100
Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq. PMID 34875090	Nucleic Acids Res	2022	56	L1 56/100
A transcriptomic atlas of Aedes aegypti reveals detailed functional organization of major body parts and gut regional specializations in sugar-fed and bl PMID 35471187	Elife	2022	73	L1 73/100
SnakeMAGs: a simple, efficient, flexible and scalable workflow to reconstruct prokaryotic genomes from metagenomes. PMID 36875992	F1000Res	2022	67	L1 67/100