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Harnessing secretory pathway differences between HEK293 and CHO to rescue production of difficult to express proteins.
PMID 35301123 · Metab Eng · 2022
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Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L.⚑
PMID 35328546 · Int J Mol Sci · 2022
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TC-hunter: identification of the insertion site of a transgenic gene within the host genome.
PMID 35184734 · BMC Genomics · 2022
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epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing.⚑
PMID 35178872 · Mol Ecol Resour · 2022
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Downstream high-speed plasma jet generation as a direct consequence of shock reformation.
PMID 35105885 · Nat Commun · 2022
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snpQT: flexible, reproducible, and comprehensive quality control and imputation of genomic data.⚑
PMID 34900230 · F1000Res · 2021
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RNA modifications detection by comparative Nanopore direct RNA sequencing.
PMID 34893601 · Nat Commun · 2021
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Candidates for Balancing Selection in Leishmania donovani Complex Parasites.
PMID 34865011 · Genome Biol Evol · 2021
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Phosphorylation of ribosomal protein S6 differentially affects mRNA translation based on ORF length.
PMID 34871442 · Nucleic Acids Res · 2021
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Defactinib inhibits PYK2 phosphorylation of IRF5 and reduces intestinal inflammation.
PMID 34795257 · Nat Commun · 2021
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EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics.⚑
PMID 34805989 · NAR Genom Bioinform · 2021
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Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs.
PMID 34811438 · Sci Rep · 2021
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Phase transition specified by a binary code patterns the vertebrate eye cup.
PMID 34757798 · Sci Adv · 2021
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Essential Genes of Vibrio anguillarum and Other Vibrio spp. Guide the Development of New Drugs and Vaccines.
PMID 34745063 · Front Microbiol · 2021
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Design considerations for workflow management systems use in production genomics research and the clinic.
PMID 34737383 · Sci Rep · 2021
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Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes.
PMID 34742227 · Genet Sel Evol · 2021
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Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation.
PMID 34719737 · Cell Mol Life Sci · 2021
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Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses.
PMID 34675242 · Sci Rep · 2021
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metaGEM: reconstruction of genome scale metabolic models directly from metagenomes.
PMID 34614189 · Nucleic Acids Res · 2021
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Application of alternative de novo motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA
PMID 34547062 · Vavilovskii Zhurnal Genet Selektsii · 2021
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Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients.
PMID 34421903 · Front Immunol · 2021
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MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction.
PMID 34172000 · BMC Genomics · 2021
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TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes.
PMID 34197621 · Nucleic Acids Res · 2021
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Blood RNA signature RISK4LEP predicts leprosy years before clinical onset.⚑
PMID 34090257 · EBioMedicine · 2021
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Microbial sulfate reduction by Desulfovibrio is an important source of hydrogen sulfide from a large swine finishing facility.⚑
PMID 34021225 · Sci Rep · 2021
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treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses.
PMID 34001188 · Genome Biol · 2021
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From tides to nucleotides: Genomic signatures of adaptation to environmental heterogeneity in barnacles.
PMID 33960035 · Mol Ecol · 2021
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A worldwide map of swine short tandem repeats and their associations with evolutionary and environmental adaptations.⚑
PMID 33892623 · Genet Sel Evol · 2021
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Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod.⚑
PMID 33782539 · Commun Biol · 2021
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Toward a Consensus in the Repertoire of Hemocytes Identified in Drosophila.
PMID 33748138 · Front Cell Dev Biol · 2021
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WASP: a versatile, web-accessible single cell RNA-Seq processing platform.
PMID 33736596 · BMC Genomics · 2021
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Circulating mucosal-associated invariant T cells identify patients responding to anti-PD-1 therapy.
PMID 33723257 · Nat Commun · 2021
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Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data.
PMID 33575569 · NAR Genom Bioinform · 2019
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lncEvo: automated identification and conservation study of long noncoding RNAs.
PMID 33563213 · BMC Bioinformatics · 2021
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Extensive tissue-specific expression variation and novel regulators underlying circadian behavior.
PMID 33514540 · Sci Adv · 2021
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Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma.
PMID 33420019 · Nat Commun · 2021
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Trem2 promotes anti-inflammatory responses in microglia and is suppressed under pro-inflammatory conditions.
PMID 32959884 · Hum Mol Genet · 2020
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A crowdsourced set of curated structural variants for the human genome.
PMID 32559231 · PLoS Comput Biol · 2020
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miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems.
PMID 32374865 · Nucleic Acids Res · 2020
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STAT3-dependent analysis reveals PDK4 as independent predictor of recurrence in prostate cancer.
PMID 32323921 · Mol Syst Biol · 2020
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MasterOfPores: A Workflow for the Analysis of Oxford Nanopore Direct RNA Sequencing Datasets.
PMID 32256520 · Front Genet · 2020
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Integrative network modeling reveals mechanisms underlying T cell exhaustion.
PMID 32024856 · Sci Rep · 2020
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Transcriptomic profiling of skeletal muscle adaptations to exercise and inactivity.
PMID 31980607 · Nat Commun · 2020
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PulmonDB: a curated lung disease gene expression database.⚑
PMID 31949184 · Sci Rep · 2020
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Comparative profiling of skeletal muscle models reveals heterogeneity of transcriptome and metabolism.
PMID 31825657 · Am J Physiol Cell Physiol · 2019
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Histone hyperacetylation disrupts core gene regulatory architecture in rhabdomyosarcoma.⚑
PMID 31784732 · Nat Genet · 2019
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Transcriptomic Adjustments of Staphylococcus aureus COL (MRSA) Forming Biofilms Under Acidic and Alkaline Conditions.⚑
PMID 31681245 · Front Microbiol · 2019
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Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection.
PMID 31533612 · BMC Bioinformatics · 2019
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Improved precision of epigenetic clock estimates across tissues and its implication for biological ageing.
PMID 31443728 · Genome Med · 2019
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