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32 matching publication(s)

Publication	Journal	Year	Score	Verdict
snpQT: flexible, reproducible, and comprehensive quality control and imputation of genomic data. ⚑ PMID 34900230	F1000Res	2021	67	L1 67/100 ⚑
RNA modifications detection by comparative Nanopore direct RNA sequencing. PMID 34893601	Nat Commun	2021	50	L1 50/100
Candidates for Balancing Selection in Leishmania donovani Complex Parasites. PMID 34865011	Genome Biol Evol	2021	64	L1 64/100
Phosphorylation of ribosomal protein S6 differentially affects mRNA translation based on ORF length. PMID 34871442	Nucleic Acids Res	2021	58	L1 58/100
Defactinib inhibits PYK2 phosphorylation of IRF5 and reduces intestinal inflammation. PMID 34795257	Nat Commun	2021	67	L1 67/100
EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics. ⚑ PMID 34805989	NAR Genom Bioinform	2021	54	L1 54/100 ⚑
Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs. PMID 34811438	Sci Rep	2021	50	L1 50/100
Phase transition specified by a binary code patterns the vertebrate eye cup. PMID 34757798	Sci Adv	2021	74	L1 74/100
Essential Genes of Vibrio anguillarum and Other Vibrio spp. Guide the Development of New Drugs and Vaccines. PMID 34745063	Front Microbiol	2021	67	L1 67/100
Design considerations for workflow management systems use in production genomics research and the clinic. PMID 34737383	Sci Rep	2021	57	L1 57/100
Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes. PMID 34742227	Genet Sel Evol	2021	53	L1 53/100
Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation. PMID 34719737	Cell Mol Life Sci	2021	50	L1 50/100
Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses. PMID 34675242	Sci Rep	2021	69	L1 69/100
metaGEM: reconstruction of genome scale metabolic models directly from metagenomes. PMID 34614189	Nucleic Acids Res	2021	64	64/100
Application of alternative de novo motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA PMID 34547062	Vavilovskii Zhurnal Genet Selektsii	2021	62	L1 62/100
Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients. PMID 34421903	Front Immunol	2021	71	71/100
MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction. PMID 34172000	BMC Genomics	2021	74	L1 74/100
TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes. PMID 34197621	Nucleic Acids Res	2021	60	L1 60/100
Blood RNA signature RISK4LEP predicts leprosy years before clinical onset. ⚑ PMID 34090257	EBioMedicine	2021	53	L1 53/100 ⚑
Sustainable data analysis with Snakemake. PMID 34035898	F1000Res	2021	71	L1 71/100
Microbial sulfate reduction by Desulfovibrio is an important source of hydrogen sulfide from a large swine finishing facility. ⚑ PMID 34021225	Sci Rep	2021	70	L1 70/100 ⚑
treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses. PMID 34001188	Genome Biol	2021	73	L1 73/100
From tides to nucleotides: Genomic signatures of adaptation to environmental heterogeneity in barnacles. PMID 33960035	Mol Ecol	2021	59	L1 59/100
A worldwide map of swine short tandem repeats and their associations with evolutionary and environmental adaptations. ⚑ PMID 33892623	Genet Sel Evol	2021	63	L1 63/100 ⚑
Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod. ⚑ PMID 33782539	Commun Biol	2021	57	L1 57/100 ⚑
Toward a Consensus in the Repertoire of Hemocytes Identified in Drosophila. PMID 33748138	Front Cell Dev Biol	2021	74	L1 74/100
WASP: a versatile, web-accessible single cell RNA-Seq processing platform. PMID 33736596	BMC Genomics	2021	59	L1 59/100
Circulating mucosal-associated invariant T cells identify patients responding to anti-PD-1 therapy. PMID 33723257	Nat Commun	2021	70	L1 70/100
lncEvo: automated identification and conservation study of long noncoding RNAs. PMID 33563213	BMC Bioinformatics	2021	61	L1 61/100
Extensive tissue-specific expression variation and novel regulators underlying circadian behavior. PMID 33514540	Sci Adv	2021	63	L1 63/100
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma. PMID 33420019	Nat Commun	2021	50	50/100
Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing. PMID 34244540	Sci Rep	2021	50	L1 50/100