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544 matching publication(s)
An archaeal histone-like protein regulates gene expression in response to salt stress.
PMID 34883507 · Nucleic Acids Res · 2021
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Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq.
PMID 34875090 · Nucleic Acids Res · 2022
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Aryl Hydrocarbon Receptor (AhR) Activation by 2,3,7,8-Tetrachlorodibenzo-p-Dioxin (TCDD) Dose-Dependently Shifts the Gut Microbiome Consistent with the P
PMID 34830313 · Int J Mol Sci · 2021
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Population differentiation and epidemic tracking of Bursaphelenchus xylophilus in China based on chromosome-level assembly and whole-genome sequencing data.⚑
PMID 34839581 · Pest Manag Sci · 2021
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Target identification for repurposed drugs active against SARS-CoV-2 via high-throughput inverse docking.
PMID 34825285 · J Comput Aided Mol Des · 2021
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Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs.
PMID 34811438 · Sci Rep · 2021
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An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation.
PMID 34772928 · Nat Commun · 2021
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Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration.
PMID 34773081 · Commun Biol · 2021
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Lamin C is required to establish genome organization after mitosis.
PMID 34775987 · Genome Biol · 2021
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A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans.
PMID 34740326 · BMC Genomics · 2021
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Phase transition specified by a binary code patterns the vertebrate eye cup.
PMID 34757798 · Sci Adv · 2021
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Design considerations for workflow management systems use in production genomics research and the clinic.
PMID 34737383 · Sci Rep · 2021
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Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia.
PMID 34709177 · Elife · 2021
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Bioavailable Nutrients (N and P) and Precipitation Patterns Drive Cyanobacterial Blooms in Missisquoi Bay, Lake Champlain.
PMID 34683418 · Microorganisms · 2021
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Calibration-free NGS quantitation of mutations below 0.01% VAF.
PMID 34675197 · Nat Commun · 2021
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Reverse Engineering of the Pediatric Sepsis Regulatory Network and Identification of Master Regulators.
PMID 34680414 · Biomedicines · 2021
67/100
Pathway signatures derived from on-treatment tumor specimens predict response to anti-PD1 blockade in metastatic melanoma.
PMID 34654806 · Nat Commun · 2021
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Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development.
PMID 34643182 · Elife · 2021
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Bioinformatics and system biology approaches to identify pathophysiological impact of COVID-19 to the progression and severity of neurological diseases.⚑
PMID 34601390 · Comput Biol Med · 2021
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Monocarboxylate Transporter-2 Expression Restricts Tumor Growth in a Murine Model of Lung Cancer: A Multi-Omic Analysis.⚑
PMID 34638954 · Int J Mol Sci · 2021
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Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID 34561431 · Nat Commun · 2021
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HTSQualC is a flexible and one-step quality control software for high-throughput sequencing data analysis.
PMID 34548573 · Sci Rep · 2021
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Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design.
PMID 34553212 · Gigascience · 2021
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Frequency and patterns of ribonucleotide incorporation around autonomously replicating sequences in yeast reveal the division of labor of replicative DNA polyme
PMID 34551434 · Nucleic Acids Res · 2021
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A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis.
PMID 34545398 · G3 (Bethesda) · 2021
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Comparative Genomics Provides Insight into the Function of Broad-Host Range Sponge Symbionts.
PMID 34519538 · mBio · 2021
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GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning.
PMID 34461978 · Genome Med · 2021
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Effect of elevation, season and accelerated snowmelt on biogeochemical processes during isolated conifer needle litter decomposition.
PMID 34434657 · PeerJ · 2021
50/100
Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients.
PMID 34421903 · Front Immunol · 2021
71/100
A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells.
PMID 34426512 · Genome Res · 2021
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Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations.
PMID 34411106 · PLoS Genet · 2021
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CONSULT: accurate contamination removal using locality-sensitive hashing.
PMID 34377979 · NAR Genom Bioinform · 2021
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Creation of a Single Cell RNASeq Meta-Atlas to Define Human Liver Immune Homeostasis.⚑
PMID 34335581 · Front Immunol · 2021
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Identifying COVID-19-Specific Transcriptomic Biomarkers with Machine Learning Methods.⚑
PMID 34307679 · Biomed Res Int · 2021
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miRge3.0: a comprehensive microRNA and tRF sequencing analysis pipeline.
PMID 34308351 · NAR Genom Bioinform · 2021
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Systematic review of human post-mortem immunohistochemical studies and bioinformatics analyses unveil the complexity of astrocyte reaction in Alzheimer's diseas
PMID 34297416 · Neuropathol Appl Neurobiol · 2021
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Reactivation of a developmentally silenced embryonic globin gene.
PMID 34290235 · Nat Commun · 2021
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DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data.
PMID 34261540 · Genome Med · 2021
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Collisionless relaxation of a disequilibrated current sheet and implications for bifurcated structures.
PMID 34145266 · Nat Commun · 2021
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TGF-β-dependent reprogramming of amino acid metabolism induces epithelial-mesenchymal transition in non-small cell lung cancers.
PMID 34168290 · Commun Biol · 2021
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Profiling chromatin accessibility responses in human neutrophils with sensitive pathogen detection.⚑
PMID 34145026 · Life Sci Alliance · 2021
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A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre.
PMID 34140473 · Nat Commun · 2021
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R2DT is a framework for predicting and visualising RNA secondary structure using templates.
PMID 34108470 · Nat Commun · 2021
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Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines.
PMID 34093998 · Comput Struct Biotechnol J · 2021
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Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis.
PMID 34079055 · Commun Biol · 2021
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RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis.
PMID 34082707 · BMC Bioinformatics · 2021
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pyrpipe: a Python package for RNA-Seq workflows.
PMID 34085037 · NAR Genom Bioinform · 2021
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Duvernoy's Gland Transcriptomics of the Plains Black-Headed Snake, Tantilla nigriceps (Squamata, Colubridae): Unearthing the Venom of Small Rear-Fanged S
PMID 34066626 · Toxins (Basel) · 2021
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