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17 matching publication(s)

Publication	Journal	Year	Score	Verdict
High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface. PMID 25122613	Genome Res	2014	87	L1 87/100
Cyrface: An interface from Cytoscape to R that provides a user interface to R packages. PMID 24715956	F1000Res	2013	67	L1 67/100
Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments. PMID 24304889	Nucleic Acids Res	2013	84	L1 84/100
Ensembl 2013. PMID 23203987	Nucleic Acids Res	2012	85	L1 85/100
Rfam 15: RNA families database in 2025. PMID 39526405	Nucleic Acids Res	2025	68	L1 68/100
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testin PMID 38860884	Microb Genom	2024	75	L1 75/100
MetaGT: A pipeline for de novo assembly of metatranscriptomes with the aid of metagenomic data. PMID 36386613	Front Microbiol	2022	83	L1 83/100
Implementing the reuse of public DIA proteomics datasets: from the PRIDE database to Expression Atlas. PMID 35701420	Sci Data	2022	50	L1 50/100
Identification of phenotype-specific networks from paired gene expression-cell shape imaging data. PMID 35197309	Genome Res	2022	100	L1 100/100
RNA modifications detection by comparative Nanopore direct RNA sequencing. PMID 34893601	Nat Commun	2021	50	L1 50/100
Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses. PMID 34675242	Sci Rep	2021	69	L1 69/100
GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. PMID 34461978	Genome Med	2021	78	78/100
MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction. PMID 34172000	BMC Genomics	2021	74	L1 74/100
R2DT is a framework for predicting and visualising RNA secondary structure using templates. PMID 34108470	Nat Commun	2021	87	L1 87/100
Sustainable data analysis with Snakemake. PMID 34035898	F1000Res	2021	71	L1 71/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100
Gene Expression Atlas update--a value-added database of microarray and sequencing-based functional genomics experiments. PMID 22064864	Nucleic Acids Res	2011	83	L1 83/100