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16 matching publication(s)

Publication	Journal	Year	Score	Verdict
Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic. ⚑ PMID 23516341	PLoS Comput Biol	2013	44	L1 44/100 ⚑
Author Correction: Next-generation phenotyping integrated in a national framework for patients with ultrarare disorders improves genetic diagnostics and yields new molecular findings PMID 40555819	Nature Genetics (Author Correction 2025; orig 2024;56:1644)	2025	76	L1 76/100
GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets. ⚑ PMID 40208796	Gigascience	2025	76	L1 76/100 ⚑
RummaGEO: Automatic mining of human and mouse gene sets from GEO. PMID 39569206	Patterns (N Y)	2024	63	L1 63/100
Charting and probing the activity of ADARs in human development and cell-fate specification. PMID 39537590	Nat Commun	2024	100	L1 100/100
Next-generation phenotyping integrated in a national framework for patients with ultrarare disorders improves genetic diagnostics and yields new molecular findi PMID 39039281	Nat Genet	2024	87	L1 87/100
D2H2: diabetes data and hypothesis hub. PMID 38107655	Bioinform Adv	2023	—	not yet assessed
A temporal classifier predicts histopathology state and parses acute-chronic phasing in inflammatory bowel disease patients. PMID 36694043	Commun Biol	2023	83	L1 83/100
nf-rnaSeqCount: A Nextflow pipeline for obtaining raw read counts from RNA-seq data. PMID 35574063	S Afr Comput J	2021	95	L1 95/100
Profiling Selective Packaging of Host RNA and Viral RNA Modification in SARS-CoV-2 Viral Preparations. PMID 35186917	Front Cell Dev Biol	2022	56	L1 56/100
DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data. PMID 34261540	Genome Med	2021	84	L1 84/100
A reference profile-free deconvolution method to infer cancer cell-intrinsic subtypes and tumor-type-specific stromal profiles. PMID 32111252	Genome Med	2020	91	L1 91/100
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data. PMID 30951143	Database (Oxford)	2019	80	L1 80/100
PI3K inhibitors protect against glucocorticoid-induced skin atrophy. PMID 30737086	EBioMedicine	2019	76	L1 76/100
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study. PMID 27583132	F1000Res	2016	74	L1 74/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100