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319 matching publication(s)

Publication	Journal	Year	Score	Verdict
Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials. PMID 33558569	Sci Data	2021	94	L1 94/100
Qualitative Transcriptional Signature for the Pathological Diagnosis of Pancreatic Cancer. PMID 33173782	Front Mol Biosci	2020	71	L1 71/100
Inference of Subpathway Activity Profiles Reveals Metabolism Abnormal Subpathway Regions in Glioblastoma Multiforme. PMID 33072547	Front Oncol	2020	89	L1 89/100
Fluent genomics with plyranges and tximeta. PMID 32528659	F1000Res	2020	69	L1 69/100
Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex. PMID 32176601	Microb Genom	2020	79	L1 79/100
RNAmountAlign: Efficient software for local, global, semiglobal pairwise and multiple RNA sequence/structure alignment. PMID 31978147	PLoS One	2020	71	L1 71/100
Evaluating sequence data quality from the Swift Accel-Amplicon CFTR Panel. PMID 31913291	Sci Data	2020	89	L1 89/100
Draft Genome Sequences of Antimicrobial-Resistant Shigella Clinical Isolates from Pakistan. PMID 31346012	Microbiol Resour Announc	2019	92	L1 92/100
A curated collection of transcriptome datasets to investigate the molecular mechanisms of immunoglobulin E-mediated atopic diseases. PMID 31290545	Database (Oxford)	2019	62	L1 62/100
MZPAQ: a FASTQ data compression tool. PMID 31171931	Source Code Biol Med	2019	58	L1 58/100
SMAGEXP: a galaxy tool suite for transcriptomics data meta-analysis. PMID 30698691	Gigascience	2019	82	L1 82/100
First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_. ⚑ PMID 30691411	BMC Bioinformatics	2019	30	L1 30/100 ⚑
Predicting position along a looping immune response trajectory. PMID 30296270	PLoS One	2018	98	L1 98/100
Genome-wide screening of potential RNase Y-processed mRNAs in the M49 serotype Streptococcus pyogenes NZ131. ⚑ PMID 29900693	Microbiologyopen	2018	57	L1 57/100 ⚑
Nimbus: a design-driven analyses suite for amplicon-based NGS data. PMID 29538618	Bioinformatics	2018	64	L1 64/100
A cross-species approach to identify transcriptional regulators exemplified for Dnajc22 and Hnf4a. PMID 28642491	Sci Rep	2017	76	L1 76/100
Viewing RNA-seq data on the entire human genome. PMID 28979763	F1000Res	2017	50	L1 50/100
Representing and querying disease networks using graph databases. PMID 27462371	BioData Min	2016	77	L1 77/100
Long-read nanopore shotgun metagenomic DNA sequencing for river biodiversity, wildlife, pollution, and environmental health monitoring. PMID 42038409	NAR Genom Bioinform	2026	78	L1 78/100