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24 matching publication(s)

Publication	Journal	Year	Score	Verdict
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. PMID 22955991	Genome Res	2012	74	L1 74/100
Targeting the epigenome and the integrated stress response to normalize colorectal cancer subclonal plasticity and progression. PMID 41963303	Cell Death Dis	2026	68	L1 68/100
ZAP targets aberrant mRNA transcripts encoding proteins with defective signal peptides for degradation. PMID 41820617	EMBO J	2026	50	L1 50/100
Genomics Define Malignant Transformation in Myeloma Precursor Conditions. PMID 41061199	J Clin Oncol	2025	78	L1 78/100
Covalent binding of thioredoxin to TXNIP is required for diet-induced insulin resistance in the liver. PMID 40345590	J Biol Chem	2025	87	L1 87/100
Data-driven projections of candidate enhancer-activating SNPs in immune regulation. PMID 40011812	BMC Genomics	2025	57	L1 57/100
Rfam 15: RNA families database in 2025. PMID 39526405	Nucleic Acids Res	2025	68	L1 68/100
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testin PMID 38860884	Microb Genom	2024	75	L1 75/100
Loss of CD4+ T cell-intrinsic arginase 1 accelerates Th1 response kinetics and reduces lung pathology during influenza infection. PMID 37572656	Immunity	2023	68	L1 68/100
Progressive transformation of the HIV-1 reservoir cell profile over two decades of antiviral therapy. PMID 36596305	Cell Host Microbe	2023	80	L1 80/100
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms. PMID 36262335	F1000Res	2022	59	L1 59/100
Transcriptomics, regulatory syntax, and enhancer identification in mesoderm-induced ESCs at single-cell resolution. ⚑ PMID 35977485	Cell Rep	2022	63	L1 63/100 ⚑
EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts. ⚑ PMID 35561186	Bioinformatics	2022	49	L1 49/100 ⚑
Enhanced protein isoform characterization through long-read proteogenomics. PMID 35241129	Genome Biol	2022	79	L1 79/100
The butyrophilin 1a1 knockout mouse revisited: Ablation of Btn1a1 leads to concurrent cell death and renewal in the mammary epithelium during lactation. PMID 34938960	FASEB Bioadv	2021	98	L1 98/100
R2DT is a framework for predicting and visualising RNA secondary structure using templates. PMID 34108470	Nat Commun	2021	87	L1 87/100
Tumor methionine metabolism drives T-cell exhaustion in hepatocellular carcinoma. PMID 33674593	Nat Commun	2021	78	L1 78/100
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma. PMID 33420019	Nat Commun	2021	50	50/100
A crowdsourced set of curated structural variants for the human genome. PMID 32559231	PLoS Comput Biol	2020	71	L1 71/100
Molecular and Clinical Relevance of ZBTB38 Expression Levels in Prostate Cancer. ⚑ PMID 32365491	Cancers (Basel)	2020	35	L1 35/100 ⚑
Histone hyperacetylation disrupts core gene regulatory architecture in rhabdomyosarcoma. ⚑ PMID 31784732	Nat Genet	2019	58	58/100 ⚑
Eye in a Disk: eyeIntegration Human Pan-Eye and Body Transcriptome Database Version 1.0. PMID 31343654	Invest Ophthalmol Vis Sci	2019	94	L1 94/100
Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data. PMID 29420797	Nucleic Acids Res	2018	68	L1 68/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100