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623 matching publication(s)
Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era.
PMID 34310590 · PLoS Comput Biol · 2021
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Systematic review of human post-mortem immunohistochemical studies and bioinformatics analyses unveil the complexity of astrocyte reaction in Alzheimer's diseas
PMID 34297416 · Neuropathol Appl Neurobiol · 2021
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Reactivation of a developmentally silenced embryonic globin gene.
PMID 34290235 · Nat Commun · 2021
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DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data.
PMID 34261540 · Genome Med · 2021
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Dental Plaque Microbial Resistomes of Periodontal Health and Disease and Their Changes after Scaling and Root Planing Therapy.
PMID 34287005 · mSphere · 2021
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A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex.
PMID 34253796 · Sci Rep · 2021
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Computationally scalable regression modeling for ultrahigh-dimensional omics data with ParProx.
PMID 34254998 · Brief Bioinform · 2021
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Detection of Virus-Related Sequences Associated With Potential Etiologies of Hepatitis in Liver Tissue Samples From Rats, Mice, Shrews, and Bats.
PMID 34177835 · Front Microbiol · 2021
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Collisionless relaxation of a disequilibrated current sheet and implications for bifurcated structures.
PMID 34145266 · Nat Commun · 2021
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TGF-β-dependent reprogramming of amino acid metabolism induces epithelial-mesenchymal transition in non-small cell lung cancers.
PMID 34168290 · Commun Biol · 2021
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Identification and analysis of genes associated with epithelial ovarian cancer by integrated bioinformatics methods.
PMID 34143800 · PLoS One · 2021
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A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre.
PMID 34140473 · Nat Commun · 2021
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R2DT is a framework for predicting and visualising RNA secondary structure using templates.
PMID 34108470 · Nat Commun · 2021
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Systematic benchmarking of tools for CpG methylation detection from nanopore sequencing.
PMID 34103501 · Nat Commun · 2021
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Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines.
PMID 34093998 · Comput Struct Biotechnol J · 2021
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Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis.
PMID 34079055 · Commun Biol · 2021
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RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis.
PMID 34082707 · BMC Bioinformatics · 2021
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pyrpipe: a Python package for RNA-Seq workflows.
PMID 34085037 · NAR Genom Bioinform · 2021
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Duvernoy's Gland Transcriptomics of the Plains Black-Headed Snake, Tantilla nigriceps (Squamata, Colubridae): Unearthing the Venom of Small Rear-Fanged S
PMID 34066626 · Toxins (Basel) · 2021
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Similarities and Differences in Gene Expression Networks Between the Breast Cancer Cell Line Michigan Cancer Foundation-7 and Invasive Human Breast Cancer Tissu
PMID 34056582 · Front Artif Intell · 2021
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De Novo Transcriptome Meta-Assembly of the Mixotrophic Freshwater Microalga Euglena gracilis.
PMID 34072576 · Genes (Basel) · 2021
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The relationship between PLOD1 expression level and glioma prognosis investigated using public databases.
PMID 34040895 · PeerJ · 2021
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High-resolution profiling of pathways of escape for SARS-CoV-2 spike-binding antibodies.
PMID 34010620 · Cell · 2021
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eVITTA: a web-based visualization and inference toolbox for transcriptome analysis.
PMID 34019643 · Nucleic Acids Res · 2021
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Genome-wide insights into population structure and host specificity of Campylobacter jejuni.
PMID 33990625 · Sci Rep · 2021
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Characterization of ALTO-encoding circular RNAs expressed by Merkel cell polyomavirus and trichodysplasia spinulosa polyomavirus.
PMID 33999949 · PLoS Pathog · 2021
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Landscape of allele-specific transcription factor binding in the human genome.
PMID 33980847 · Nat Commun · 2021
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Determination of complete chromosomal haplotypes by bulk DNA sequencing.
PMID 33957932 · Genome Biol · 2021
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geneshot: gene-level metagenomics identifies genome islands associated with immunotherapy response.
PMID 33952321 · Genome Biol · 2021
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Human methylome variation across Infinium 450K data on the Gene Expression Omnibus.
PMID 33937763 · NAR Genom Bioinform · 2021
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Estimation of peptide elongation times from ribosome profiling spectra.
PMID 33885812 · Nucleic Acids Res · 2021
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Co-regulation and function of FOXM1/RHNO1 bidirectional genes in cancer.
PMID 33890574 · Elife · 2021
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Analysis of a photosynthetic cyanobacterium rich in internal membrane systems via gradient profiling by sequencing (Grad-seq).
PMID 33793824 · Plant Cell · 2021
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Competitive binding of STATs to receptor phospho-Tyr motifs accounts for altered cytokine responses.
PMID 33871355 · Elife · 2021
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Generic injuries are sufficient to induce ectopic Wnt organizers in Hydra.
PMID 33779545 · Elife · 2021
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Identification of Proteins Deregulated by Platinum-Based Chemotherapy as Novel Biomarkers and Therapeutic Targets in Non-Small Cell Lung Cancer.
PMID 33777753 · Front Oncol · 2021
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Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager.
PMID 33777521 · PeerJ · 2021
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Development of double-positive thymocytes at single-cell resolution.
PMID 33771202 · Genome Med · 2021
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The oncogene AAMDC links PI3K-AKT-mTOR signaling with metabolic reprograming in estrogen receptor-positive breast cancer.
PMID 33772001 · Nat Commun · 2021
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Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer.
PMID 33729159 · Elife · 2021
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Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions.
PMID 33743211 · Cell · 2021
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Gene co-expression network analysis in human spinal cord highlights mechanisms underlying amyotrophic lateral sclerosis susceptibility.
PMID 33707641 · Sci Rep · 2021
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The SARS-CoV-2 subgenome landscape and its novel regulatory features.
PMID 33713597 · Mol Cell · 2021
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Polyploidy-associated paramutation in Arabidopsis is determined by small RNAs, temperature, and allele structure.
PMID 33690630 · PLoS Genet · 2021
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TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining.
PMID 33705981 · Genomics Proteomics Bioinformatics · 2021
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Daily temperature cycles promote alternative splicing of RNAs encoding SR45a, a splicing regulator in maize.
PMID 33705553 · Plant Physiol · 2021
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CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA.
PMID 33667225 · PLoS Comput Biol · 2021
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Tumor methionine metabolism drives T-cell exhaustion in hepatocellular carcinoma.
PMID 33674593 · Nat Commun · 2021
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