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571 matching publication(s)
Design considerations for workflow management systems use in production genomics research and the clinic.
PMID 34737383 · Sci Rep · 2021
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Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes.
PMID 34742227 · Genet Sel Evol · 2021
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53/100
Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia.
PMID 34709177 · Elife · 2021
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78/100
Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation.
PMID 34719737 · Cell Mol Life Sci · 2021
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Phased differentiation of γδ T and T CD8 tumor-infiltrating lymphocytes revealed by single-cell transcriptomics of human cancers.⚑
PMID 34721945 · Oncoimmunology · 2021
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FA-nf: A Functional Annotation Pipeline for Proteins from Non-Model Organisms Implemented in Nextflow.
PMID 34681040 · Genes (Basel) · 2021
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A Deeper Insight into Evolutionary Patterns and Phylogenetic History of ASFV Epidemics in Sardinia (Italy) through Extensive Genomic Sequencing.
PMID 34696424 · Viruses · 2021
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Graph-Based Approaches Significantly Improve the Recovery of Antibiotic Resistance Genes From Complex Metagenomic Datasets.
PMID 34690959 · Front Microbiol · 2021
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Systems Analysis Reveals Ageing-Related Perturbations in Retinoids and Sex Hormones in Alzheimer's and Parkinson's Diseases.
PMID 34680427 · Biomedicines · 2021
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75/100
Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses.
PMID 34675242 · Sci Rep · 2021
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Chromosome-Scale Assembly of the Complete Genome Sequence of Porcisia hertigi, Isolate C119, Strain LV43.
PMID 34647802 · Microbiol Resour Announc · 2021
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metaGEM: reconstruction of genome scale metabolic models directly from metagenomes.
PMID 34614189 · Nucleic Acids Res · 2021
64/100
Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage.
PMID 34599324 · Genome Biol Evol · 2021
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Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID 34561431 · Nat Commun · 2021
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A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis.
PMID 34545398 · G3 (Bethesda) · 2021
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Application of alternative de novo motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA
PMID 34547062 · Vavilovskii Zhurnal Genet Selektsii · 2021
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62/100
Antigen and checkpoint receptor engagement recalibrates T cell receptor signal strength.⚑
PMID 34534438 · Immunity · 2021
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37/100
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Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) orientalis, Isolate LSCM4, Strain LV768.
PMID 34498920 · Microbiol Resour Announc · 2021
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Dynamics of the compartmentalized Streptomyces chromosome during metabolic differentiation.
PMID 34471117 · Nat Commun · 2021
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Chromosome-scale genome sequencing, assembly and annotation of six genomes from subfamily Leishmaniinae.
PMID 34489462 · Sci Data · 2021
92/100
Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) enriettii, Isolate CUR178, Strain LV763.⚑
PMID 34498918 · Microbiol Resour Announc · 2021
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Whole genome sequencing reveals possible host species adaptation of Streptococcus dysgalactiae.
PMID 34462475 · Sci Rep · 2021
not yet assessed
GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning.
PMID 34461978 · Genome Med · 2021
78/100
Interplay between Non-Coding RNA Transcription, Stringent/Relaxed Phenotype and Antibiotic Production in Streptomyces ambofaciens.
PMID 34438997 · Antibiotics (Basel) · 2021
49/100
Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK.
PMID 34427554 · Microb Genom · 2021
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Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients.
PMID 34421903 · Front Immunol · 2021
71/100
poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing.
PMID 34394197 · Front Genet · 2021
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Recombination Facilitates Adaptive Evolution in Rhizobial Soil Bacteria.
PMID 34410427 · Mol Biol Evol · 2021
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Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations.
PMID 34411106 · PLoS Genet · 2021
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No data access
Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era.
PMID 34310590 · PLoS Comput Biol · 2021
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Systematic review of human post-mortem immunohistochemical studies and bioinformatics analyses unveil the complexity of astrocyte reaction in Alzheimer's diseas
PMID 34297416 · Neuropathol Appl Neurobiol · 2021
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Reactivation of a developmentally silenced embryonic globin gene.
PMID 34290235 · Nat Commun · 2021
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85/100
A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex.
PMID 34253796 · Sci Rep · 2021
84/100
MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction.
PMID 34172000 · BMC Genomics · 2021
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TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes.
PMID 34197621 · Nucleic Acids Res · 2021
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A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre.
PMID 34140473 · Nat Commun · 2021
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R2DT is a framework for predicting and visualising RNA secondary structure using templates.
PMID 34108470 · Nat Commun · 2021
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Systematic benchmarking of tools for CpG methylation detection from nanopore sequencing.
PMID 34103501 · Nat Commun · 2021
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Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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Blood RNA signature RISK4LEP predicts leprosy years before clinical onset.⚑
PMID 34090257 · EBioMedicine · 2021
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RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis.
PMID 34082707 · BMC Bioinformatics · 2021
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Similarities and Differences in Gene Expression Networks Between the Breast Cancer Cell Line Michigan Cancer Foundation-7 and Invasive Human Breast Cancer Tissu
PMID 34056582 · Front Artif Intell · 2021
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De Novo Transcriptome Meta-Assembly of the Mixotrophic Freshwater Microalga Euglena gracilis.
PMID 34072576 · Genes (Basel) · 2021
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Microbial sulfate reduction by Desulfovibrio is an important source of hydrogen sulfide from a large swine finishing facility.⚑
PMID 34021225 · Sci Rep · 2021
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Genome-wide insights into population structure and host specificity of Campylobacter jejuni.
PMID 33990625 · Sci Rep · 2021
94/100
Characterization of ALTO-encoding circular RNAs expressed by Merkel cell polyomavirus and trichodysplasia spinulosa polyomavirus.
PMID 33999949 · PLoS Pathog · 2021
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treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses.
PMID 34001188 · Genome Biol · 2021
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Accelerated Evolution of Tissue-Specific Genes Mediates Divergence Amidst Gene Flow in European Green Lizards.⚑
PMID 33988711 · Genome Biol Evol · 2021
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