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18 matching publication(s)

Publication	Journal	Year	Score	Verdict
TEMP: a computational method for analyzing transposable element polymorphism in populations. PMID 24753423	Nucleic Acids Res	2014	61	L1 61/100
The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment. ⚑ PMID 25506420	F1000Res	2013	42	L1 42/100 ⚑
Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms. PMID 24555103	F1000Res	2013	71	L1 71/100
The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository. PMID 40926267	Genome Biol	2025	99	L1 99/100
Interpretable and integrative analysis of single-cell multiomics with scMKL. PMID 40770488	Commun Biol	2025	65	L1 65/100
Increased prevalence of hybrid epithelial/mesenchymal state and enhanced phenotypic heterogeneity in basal breast cancer. PMID 38974967	iScience	2024	95	95/100
Analytical code sharing practices in biomedical research. PMID 38983240	PeerJ Comput Sci	2024	92	L1 92/100
Mutually exclusive teams-like patterns of gene regulation characterize phenotypic heterogeneity along the noradrenergic-mesenchymal axis in neuroblastoma. PMID 38230570	Cancer Biol Ther	2024	87	L1 87/100
Fatty acid synthesis suppresses dietary polyunsaturated fatty acid use PMID 38167725	Nature Communications	2024	94	L1 94/100
Identification of herpesvirus transcripts from genomic regions around the replication origins. PMID 37773348	Sci Rep	2023	59	L1 59/100
Emergent dynamics of underlying regulatory network links EMT and androgen receptor-dependent resistance in prostate cancer. PMID 36851919	Comput Struct Biotechnol J	2023	78	L2 78/100
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms. PMID 36262335	F1000Res	2022	59	L1 59/100
Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition. ⚑ PMID 35819852	J Clin Invest	2022	68	L1 68/100 ⚑
Transcriptomic-Based Quantification of the Epithelial-Hybrid-Mesenchymal Spectrum across Biological Contexts. PMID 35053177	Biomolecules	2021	100	L1 100/100
Epigenetic loss of heterogeneity from low to high grade localized prostate tumours. PMID 34911933	Nat Commun	2021	79	L1 79/100
Meta-analysis of gene expression profiles of lean and obese PCOS to identify differentially regulated pathways and risk of comorbidities. PMID 32695266	Comput Struct Biotechnol J	2020	78	L1 78/100
WDR11, a WD protein that interacts with transcription factor EMX1, is mutated in idiopathic hypogonadotropic hypogonadism and Kallmann syndrome. PMID 20887964	—	2010	—	L1 No computation
Mutations in CHD7, encoding a chromatin-remodeling protein, cause idiopathic hypogonadotropic hypogonadism and Kallmann syndrome. PMID 18834967	—	2008	70	L1 70/100