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118 matching publication(s)

Publication	Journal	Year	Score	Verdict
An individualized causal framework for learning intercellular communication networks that define microenvironments of individual tumors. PMID 36548438	PLoS Comput Biol	2022	67	L1 67/100
Autoencoder Networks Decipher the Association between Lung Cancer and Alzheimer's Disease. PMID 36518809	Comput Intell Neurosci	2022	74	L1 74/100
Gene module regulation in dilated cardiomyopathy and the role of Na/K-ATPase. ⚑ PMID 35901050	PLoS One	2022	55	L1 55/100 ⚑
SEAseq: a portable and cloud-based chromatin occupancy analysis suite. PMID 35193506	BMC Bioinformatics	2022	94	L1 94/100
Assessing Bos taurus introgression in the UOA Bos indicus assembly. PMID 34922445	Genet Sel Evol	2021	86	L1 86/100
Preparation of mouse pancreatic tumor for single-cell RNA sequencing and analysis of the data. PMID 34927097	STAR Protoc	2021	50	L1 50/100
Monocarboxylate Transporter-2 Expression Restricts Tumor Growth in a Murine Model of Lung Cancer: A Multi-Omic Analysis. ⚑ PMID 34638954	Int J Mol Sci	2021	53	L1 53/100 ⚑
PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines. PMID 34093998	Comput Struct Biotechnol J	2021	77	L1 77/100
Similarities and Differences in Gene Expression Networks Between the Breast Cancer Cell Line Michigan Cancer Foundation-7 and Invasive Human Breast Cancer Tissu PMID 34056582	Front Artif Intell	2021	92	L1 92/100
Estimating and Correcting for Off-Target Cellular Contamination in Brain Cell Type Specific RNA-Seq Data. PMID 33746712	Front Mol Neurosci	2021	50	L1 50/100
Fluent genomics with plyranges and tximeta. PMID 32528659	F1000Res	2020	69	L1 69/100
RNAmountAlign: Efficient software for local, global, semiglobal pairwise and multiple RNA sequence/structure alignment. PMID 31978147	PLoS One	2020	71	L1 71/100
Evaluating sequence data quality from the Swift Accel-Amplicon CFTR Panel. PMID 31913291	Sci Data	2020	89	L1 89/100
Draft Genome Sequences of Antimicrobial-Resistant Shigella Clinical Isolates from Pakistan. PMID 31346012	Microbiol Resour Announc	2019	92	L1 92/100
First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_. ⚑ PMID 30691411	BMC Bioinformatics	2019	30	L1 30/100 ⚑
Predicting position along a looping immune response trajectory. PMID 30296270	PLoS One	2018	98	L1 98/100
Viewing RNA-seq data on the entire human genome. PMID 28979763	F1000Res	2017	50	L1 50/100
Long-read nanopore shotgun metagenomic DNA sequencing for river biodiversity, wildlife, pollution, and environmental health monitoring. PMID 42038409	NAR Genom Bioinform	2026	78	L1 78/100