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63 matching publication(s)
A platinum standard pan-genome resource that represents the population structure of Asian rice.
PMID 32265447 · Sci Data · 2020
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Energy, power, and infrastructure demands from electrifying airport ground support equipment at United States airports.
PMID 41912553 · Nat Commun · 2026
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95/100
Machine learning reveals microbial interactions driving plastic degradation across plastisphere environments.
PMID 41657981 · Front Microbiol · 2026
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87/100
Deep transcriptomics reveals cell-specific isoforms of pan-neuronal genes.
PMID 40379625 · Nat Commun · 2025
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84/100
Hippo signaling differentially regulates distal progenitor subpopulations and their transitional states to construct the mammalian lungs.
PMID 41932885 · Nat Commun · 2026
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91/100
Metatranscriptomics-based investigation of bacterial community dynamics across a dissolved organic matter gradient in southern Lake Michigan.
PMID 41860215 · Appl Environ Microbiol · 2026
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81/100
Exploring Gene Expression Patterns in Alzheimer's Disease Using a Human Microarray Data Meta-Analysis.
PMID 41744654 · Biology (Basel) · 2026
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Single-cell protein activity analysis reveals aberrant myogenesis and IGF2-PI3K pathway dependencies in MYOD1-mutant rhabdomyosarcoma.
PMID 41758938 · Sci Adv · 2026
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Evolution of Highly Repetitive Silk Genes in the Luna Moth, Actias luna.
PMID 41738778 · Genome Biol Evol · 2026
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stDyer-image improves clustering analysis of spatially resolved transcriptomics and proteomics with morphological images.
PMID 41692960 · Bioinformatics · 2026
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75/100
DMN-seq enriches DNA hypomethylated regions for biomarker discovery using 5-methylcytosine glycosylase.
PMID 41673887 · Genome Biol · 2026
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80/100
Identity rather than 3D position informs splicing of rare introns in the human genome.
PMID 41561379 · iScience · 2025
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98/100
A network-based model of Aspergillus fumigatus elucidates regulators of development and defensive natural products of an opportunistic pathogen.
PMID 41505094 · Nucleic Acids Res · 2026
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78/100
Widespread mono- and oligoadenylation direct small noncoding RNA maturation versus degradation fates.
PMID 41350938 · EMBO J · 2025
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78/100
Smart spatial omics (S2-omics) optimizes region of interest selection to capture molecular heterogeneity in diverse tissues.
PMID 41298871 · Nat Cell Biol · 2025
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A four-gene signature from blood to exclude bacterial etiology of lower respiratory tract infection in adults.
PMID 41285807 · Nat Commun · 2025
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94/100
Plasmid transmission dynamics and evolution of partner quality in a natural population of Rhizobium leguminosarum.
PMID 41212030 · mBio · 2025
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86/100
Single-cell dissection of chronic lung allograft dysfunction reveals convergent and distinct fibrotic mechanisms.
PMID 41122970 · JCI Insight · 2025
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75/100
DeepRNA-Reg: a deep-learning based approach for comparative analysis of CLIP experiments.
PMID 41055236 · RNA Biol · 2025
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Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation.
PMID 41039608 · Genome Med · 2025
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A Meta-Analysis of the Effects of Acute Sleep Deprivation on the Cortical Transcriptome in Rodent Models.
PMID 41031900 · J Sleep Res · 2025
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96/100
The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository.
PMID 40926267 · Genome Biol · 2025
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randPedPCA: rapid approximation of principal components from large pedigrees.
PMID 40877802 · Genet Sel Evol · 2025
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84/100
Chemist: A Domain-Specific Language by Chemists for Chemists.
PMID 40815845 · J Phys Chem A · 2025
89/100
Precise modulation of BRG1 levels reveals features of mSWI/SNF dosage sensitivity.
PMID 40846763 · Nat Genet · 2025
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Cell type differences in human cytomegalovirus transcription and epigenetic regulation with insights into major immediate-early enhancer-promoter control.
PMID 40758707 · PLoS Pathog · 2025
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Transcriptome-Proteome Profiling in Burkholderia thailandensis during the Transition from Exponential to Stationary Phase.
PMID 40680064 · J Proteome Res · 2025
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Genomic profiling of Streptococcus agalactiae (Group B Streptococcus) isolates from pregnant women in northeastern Mexico:
PMID 40416609 · PeerJ · 2025
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ChIP-seq Data Processing and Relative and Quantitative Signal Normalization for Saccharomyces cerevisiae.
PMID 40364978 · Bio Protoc · 2025
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Protocol for assessing regulatory elements in murine heart using an AAV9-based massively parallel reporter assay.
PMID 40252222 · STAR Protoc · 2025
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93/100
GRAMD1B is a regulator of lipid homeostasis, autophagic flux and phosphorylated tau.
PMID 40204713 · Nat Commun · 2025
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91/100
GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets.⚑
PMID 40208796 · Gigascience · 2025
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76/100
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7SL RNA and signal recognition particle orchestrate a global cellular response to acute thermal stress.
PMID 39952919 · Nat Commun · 2025
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93/100
Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits.
PMID 39901160 · Genome Biol · 2025
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86/100
Single-Cell Hi-C Technologies and Computational Data Analysis.
PMID 39887949 · Adv Sci (Weinh) · 2025
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80/100
Correcting scale distortion in RNA sequencing data.
PMID 39875825 · BMC Bioinformatics · 2025
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76/100
Enhancing chemotherapy response prediction via matched colorectal tumor-organoid gene expression analysis and network-based biomarker selection.
PMID 39754813 · Transl Oncol · 2025
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78/100
Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life.
PMID 39592593 · Nat Commun · 2024
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Charting and probing the activity of ADARs in human development and cell-fate specification.
PMID 39537590 · Nat Commun · 2024
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Protocol for the generation of single-nuclei RNA-seq libraries and quantification of heterogeneous cell types activated during social interaction.
PMID 39423127 · STAR Protoc · 2024
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78/100
Analytical code sharing practices in biomedical research.
PMID 38983240 · PeerJ Comput Sci · 2024
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92/100
Forseti: a mechanistic and predictive model of the splicing status of scRNA-seq reads.
PMID 38940130 · Bioinformatics · 2024
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PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testin
PMID 38860884 · Microb Genom · 2024
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75/100
5-methylcytosine RNA modification regulators-based patterns and features of immune microenvironment in acute myeloid leukemia.
PMID 38277218 · Aging (Albany NY) · 2024
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93/100
Cross-species comparative hippocampal transcriptomics in Alzheimer's disease.
PMID 38292167 · iScience · 2023
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75/100
The genome of the ant Tetramorium bicarinatum reveals a tandem organization of venom peptides genes allowing the prediction of their regulatory and evolutionary
PMID 38245722 · BMC Genomics · 2024
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Mutually exclusive teams-like patterns of gene regulation characterize phenotypic heterogeneity along the noradrenergic-mesenchymal axis in neuroblastoma.
PMID 38230570 · Cancer Biol Ther · 2024
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Stemness genes and miR-1247-3p expression associate with clinicopathological parameters and prognosis in lung adenocarcinoma.
PMID 37948380 · PLoS One · 2023
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spotter: a single-nucleotide resolution stochastic simulation model of supercoiling-mediated transcription and translation in prokaryotes.
PMID 37602419 · Nucleic Acids Res · 2023
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77/100