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19 matching publication(s)

Publication	Journal	Year	Score	Verdict
A Meta-Analysis of the Effects of Chronic Stress on the Prefrontal Transcriptome in Animal Models and Convergence With Existing Human Data. PMID 41566898	Brain Behav	2026	64	L1 64/100
A Meta-Analysis of the Effects of Acute Sleep Deprivation on the Cortical Transcriptome in Rodent Models. PMID 41031900	J Sleep Res	2025	96	L1 96/100
Detecting aberrant DNA methylation in Illumina DNA methylation arrays: a toolbox and recommendations for its use. PMID 37218167	Epigenetics	2023	73	L2 73/100
Fast, accurate, and racially unbiased pan-cancer tumor-only variant calling with tabular machine learning. ⚑ PMID 36611079	NPJ Precis Oncol	2023	—	L1 No data access ⚑
Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites. PMID 36064968	Nat Cell Biol	2022	98	L1 98/100
Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon. PMID 35814690	Front Microbiol	2022	86	L1 86/100
Betacoronavirus-specific alternate splicing. PMID 35074468	Genomics	2022	100	L1 100/100
Lamin C is required to establish genome organization after mitosis. PMID 34775987	Genome Biol	2021	76	L1 76/100
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design. PMID 34553212	Gigascience	2021	87	L1 87/100
miRge3.0: a comprehensive microRNA and tRF sequencing analysis pipeline. PMID 34308351	NAR Genom Bioinform	2021	—	not yet assessed
Similarities and Differences in Gene Expression Networks Between the Breast Cancer Cell Line Michigan Cancer Foundation-7 and Invasive Human Breast Cancer Tissu PMID 34056582	Front Artif Intell	2021	92	L1 92/100
Landscape of allele-specific transcription factor binding in the human genome. PMID 33980847	Nat Commun	2021	82	82/100
Human methylome variation across Infinium 450K data on the Gene Expression Omnibus. PMID 33937763	NAR Genom Bioinform	2021	88	L1 88/100
SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses. PMID 33932985	BMC Bioinformatics	2021	65	L1 65/100
Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality. PMID 32681306	Curr Genet	2020	81	L1 81/100
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community. ⚑ PMID 32019831	mSystems	2020	57	L1 57/100 ⚑
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
Genome-wide prediction of DNase I hypersensitivity using gene expression. PMID 29051481	Nat Commun	2017	79	L1 79/100
Ribosome A and P sites revealed by length analysis of ribosome profiling data. PMID 25805170	Nucleic Acids Res	2015	81	L1 81/100