Explore
← New search
622 matching publication(s)
Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon.
PMID 35814690 · Front Microbiol · 2022
L1
86/100
Analysis of the Hypoxic Response in a Mouse Cortical Collecting Duct-Derived Cell Line Suggests That Esrra Is Partially Involved in Hif1α-Mediated Hypoxia-Induc
PMID 35806266 · Int J Mol Sci · 2022
L1
76/100
getSequenceInfo: a suite of tools allowing to get genome sequence information from public repositories.
PMID 35804320 · BMC Bioinformatics · 2022
L1
99/100
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.
PMID 35794110 · Nat Commun · 2022
L1
94/100
Extensive transgressive gene expression in testis but not ovary in the homoploid hybrid Italian sparrow.
PMID 35726533 · Mol Ecol · 2022
L1
93/100
NETISCE: a network-based tool for cell fate reprogramming.
PMID 35725577 · NPJ Syst Biol Appl · 2022
85/100
A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling.
PMID 35729113 · Nat Commun · 2022
L1
84/100
Antibiotic Drug screening and Image Characterization Toolbox (A.D.I.C.T.): a robust imaging workflow to monitor antibiotic stress response in bacterial cells <i
PMID 35707454 · F1000Res · 2021
L1
88/100
Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus.
PMID 35710138 · Genes Dev · 2022
L1
81/100
Identification and functional implications of pseudouridine RNA modification on small noncoding RNAs in the mammalian pathogen Trypanosoma brucei.
PMID 35714765 · J Biol Chem · 2022
80/100
BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
PMID 35704392 · Plant J · 2022
L1
94/100
Ultra-deep multi-oncopanel sequencing of benchmarking samples with a wide range of variant allele frequencies.⚑
PMID 35680918 · Sci Data · 2022
L1
82/100
⚑
Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae.
PMID 35605195 · Plant Commun · 2022
L1
95/100
A Decentralized Kidney Transplant Biopsy Classifier for Transplant Rejection Developed Using Genes of the Banff-Human Organ Transplant Panel.
PMID 35619722 · Front Immunol · 2022
L1
90/100
Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints.
PMID 35624178 · Nat Commun · 2022
L1
84/100
TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes.
PMID 35580127 · PLoS Genet · 2022
L2
95/100
nf-rnaSeqCount: A Nextflow pipeline for obtaining raw read counts from RNA-seq data.
PMID 35574063 · S Afr Comput J · 2021
L1
95/100
Discovery of Early-Branching Wolbachia Reveals Functional Enrichment on Horizontally Transferred Genes.⚑
PMID 35547116 · Front Microbiol · 2022
L1
90/100
⚑
Quantum pixel representations and compression for N-dimensional images.
PMID 35546151 · Sci Rep · 2022
L1
87/100
A bioinformatic pipeline for simulating viral integration data.
PMID 35496474 · Data Brief · 2022
96/100
Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection
PMID 35464437 · Front Immunol · 2022
L1
90/100
A computational pipeline to visualize DNA-protein binding states using dSMF data.
PMID 35463472 · STAR Protoc · 2022
L1
89/100
Transcriptomic Data Meta-Analysis Sheds Light on High Light Response in Arabidopsis thaliana L.
PMID 35457273 · Int J Mol Sci · 2022
L1
88/100
Identification of the Wheat (Triticum aestivum) IQD Gene Family and an Expression Analysis of Candidate Genes Associated with Seed Dormancy and Germination
PMID 35456910 · Int J Mol Sci · 2022
L1
78/100
Ultra-deep sequencing data from a liquid biopsy proficiency study demonstrating analytic validity.
PMID 35418127 · Sci Data · 2022
L1
87/100
Enhanced Bioremediation Potential of Shewanella decolorationis RNA Polymerase Mutants and Evidence for Novel Azo Dye Biodegradation Pathways.
PMID 35391736 · Front Microbiol · 2022
L1
80/100
Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch.
PMID 35348734 · Nucleic Acids Res · 2022
L1
91/100
Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex.
PMID 35342602 · Ecol Evol · 2022
L1
87/100
PowerBacGWAS: a computational pipeline to perform power calculations for bacterial genome-wide association studies.
PMID 35338232 · Commun Biol · 2022
L1
85/100
Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States.
PMID 35269470 · Cells · 2022
L2
88/100
Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics.
PMID 35248155 · Environ Microbiome · 2022
L1
83/100
Enhanced protein isoform characterization through long-read proteogenomics.
PMID 35241129 · Genome Biol · 2022
L1
79/100
Identification of phenotype-specific networks from paired gene expression-cell shape imaging data.
PMID 35197309 · Genome Res · 2022
L1
100/100
SEAseq: a portable and cloud-based chromatin occupancy analysis suite.
PMID 35193506 · BMC Bioinformatics · 2022
L1
94/100
Integrated Analysis of Multiple Microarrays Based on Raw Data Identified Novel Gene Signatures in Recurrent Implantation Failure.
PMID 35197930 · Front Endocrinol (Lausanne) · 2022
L1
85/100
Topological approximate Bayesian computation for parameter inference of an angiogenesis model.
PMID 35191485 · Bioinformatics · 2022
L1
100/100
Single-Cell Differential Network Analysis with Sparse Bayesian Factor Models.
PMID 35186014 · Front Genet · 2022
L1
85/100
Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells.
PMID 35177610 · Nat Commun · 2022
L1
84/100
Large-scale quality assessment of prokaryotic genomes with metashot/prok-quality.
PMID 35136576 · F1000Res · 2021
L1
98/100
The COMBAT-TB Workbench: Making Powerful Mycobacterium tuberculosis Bioinformatics Accessible.
PMID 35138128 · mSphere · 2022
L1
90/100
A role for ColV plasmids in the evolution of pathogenic Escherichia coli ST58.
PMID 35115531 · Nat Commun · 2022
L1
95/100
ddRAD-seq reveals the genetic structure and detects signals of selection in Italian brown trout.
PMID 35100964 · Genet Sel Evol · 2022
L1
87/100
Transcriptomic-Based Quantification of the Epithelial-Hybrid-Mesenchymal Spectrum across Biological Contexts.
PMID 35053177 · Biomolecules · 2021
L1
100/100
A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer.
PMID 35047825 · NAR Cancer · 2022
L1
100/100
SLDMS: A Tool for Calculating the Overlapping Regions of Sequences.
PMID 35046988 · Front Plant Sci · 2022
L1
80/100
Species-Wide Phylogenomics of the Staphylococcus aureus Agr Operon Revealed Convergent Evolution of Frameshift Mutations.
PMID 35044202 · Microbiol Spectr · 2022
L1
79/100
An accurate method for identifying recent recombinants from unaligned sequences.
PMID 35025988 · Bioinformatics · 2022
L1
84/100