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25 matching publication(s)

Publication	Journal	Year	Score	Verdict
Bayesian transcriptome assembly. PMID 25367074	Genome Biol	2014	68	L1 68/100
Endogenous retroviral elements LTR8B and MER65 rewire PSG9 regulation to control trophoblast syncytialization and pre-eclampsia risk. PMID 41796334	Genome Biol	2026	68	L1 68/100
DMN-seq enriches DNA hypomethylated regions for biomarker discovery using 5-methylcytosine glycosylase. PMID 41673887	Genome Biol	2026	80	L1 80/100
The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository. PMID 40926267	Genome Biol	2025	99	L1 99/100
Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits. PMID 39901160	Genome Biol	2025	86	L1 86/100
Recruitment of the m6A/m6Am demethylase FTO to target RNAs by the telomeric zinc finger protein ZBTB48. PMID 39300486	Genome Biol	2024	78	L1 78/100
TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. PMID 37013657	Genome Biol	2023	89	L1 89/100
Widespread allele-specific topological domains in the human genome are not confined to imprinted gene clusters. PMID 36869353	Genome Biol	2023	64	L1 64/100
MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions. PMID 36451166	Genome Biol	2022	50	L1 50/100
KAGE: fast alignment-free graph-based genotyping of SNPs and short indels. ⚑ PMID 36195962	Genome Biol	2022	42	L1 42/100 ⚑
Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets. PMID 35672799	Genome Biol	2022	—	L1 No data access
Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data. PMID 35473573	Genome Biol	2022	—	not yet assessed
Enhanced protein isoform characterization through long-read proteogenomics. PMID 35241129	Genome Biol	2022	79	L1 79/100
Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients. PMID 35012625	Genome Biol	2022	68	L1 68/100
Lamin C is required to establish genome organization after mitosis. PMID 34775987	Genome Biol	2021	76	L1 76/100
treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses. PMID 34001188	Genome Biol	2021	73	L1 73/100
Determination of complete chromosomal haplotypes by bulk DNA sequencing. PMID 33957932	Genome Biol	2021	97	L1 97/100
geneshot: gene-level metagenomics identifies genome islands associated with immunotherapy response. PMID 33952321	Genome Biol	2021	75	L1 75/100
Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression. PMID 33722289	Genome Biol	2021	66	L1 66/100
Disome-seq reveals widespread ribosome collisions that promote cotranslational protein folding. PMID 33402206	Genome Biol	2021	74	L1 74/100
RADAR: differential analysis of MeRIP-seq data with a random effect model. ⚑ PMID 31870409	Genome Biol	2019	10	L1 10/100 ⚑
DESE: estimating driver tissues by selective expression of genes associated with complex diseases or traits. PMID 31694669	Genome Biol	2019	56	L1 56/100
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing. PMID 30744683	Genome Biol	2019	97	L1 97/100
GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes. PMID 30616647	Genome Biol	2019	96	L1 96/100
Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations a PMID 27832824	Genome Biol	2016	84	L1 84/100