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21 matching publication(s)

Publication	Journal	Year	Score	Verdict
spliceJAC: transition genes and state-specific gene regulation from single-cell transcriptome data. ⚑ PMID 36321549	Mol Syst Biol	2022	53	L1 53/100 ⚑
Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States. PMID 35269470	Cells	2022	88	L2 88/100
Pathway signatures derived from on-treatment tumor specimens predict response to anti-PD1 blockade in metastatic melanoma. PMID 34654806	Nat Commun	2021	100	L1 100/100
Antigen and checkpoint receptor engagement recalibrates T cell receptor signal strength. ⚑ PMID 34534438	Immunity	2021	37	L1 37/100 ⚑
Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis. PMID 34079055	Commun Biol	2021	96	L1 96/100
Coding and non-coding roles of MOCCI (C15ORF48) coordinate to regulate host inflammation and immunity. PMID 33837217	Nat Commun	2021	68	L1 68/100
Circulating mucosal-associated invariant T cells identify patients responding to anti-PD-1 therapy. PMID 33723257	Nat Commun	2021	70	L1 70/100
An Erg-driven transcriptional program controls B cell lymphopoiesis. PMID 32541654	Nat Commun	2020	81	L1 81/100
Unveiling prognostics biomarkers of tyrosine metabolism reprogramming in liver cancer by cross-platform gene expression analyses. ⚑ PMID 32542016	PLoS One	2020	51	L1 51/100 ⚑
STAT3-dependent analysis reveals PDK4 as independent predictor of recurrence in prostate cancer. PMID 32323921	Mol Syst Biol	2020	66	L1 66/100
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations. PMID 31799603	Nucleic Acids Res	2020	89	L1 89/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive. PMID 31114675	F1000Res	2019	90	L1 90/100
sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression. PMID 31114926	Nucleic Acids Res	2019	—	not yet assessed
Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation. PMID 30561326	Elife	2018	50	L1 50/100
Firefly genomes illuminate parallel origins of bioluminescence in beetles. PMID 30324905	Elife	2018	93	L1 93/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation. PMID 29783948	BMC Genomics	2018	85	L1 85/100
Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice. PMID 29123534	Front Plant Sci	2017	100	L1 100/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra PMID 29157210	BMC Plant Biol	2017	91	L1 91/100
Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondria ⚑ PMID 26618080	PeerJ	2015	68	L1 68/100 ⚑
Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella). ⚑ PMID 26248502	Sci Rep	2015	70	L1 70/100 ⚑