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159 matching publication(s)
Under the Shadow: Old-biased Genes Are Subject to Weak Purifying Selection at Both the Tissue- and Cell Type-Specific Levels.
PMID 41092135 · Genome Biol Evol · 2025
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Age Deceleration and Reversal Gene Patterns in Dauer Diapause.
PMID 41104926 · Aging Cell · 2025
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88/100
Integration of multi-omics and machine learning strategies identifies immune related candidate biomarkers in inflammation-associated hypertrophic cardiomyopathy
PMID 41080564 · Front Immunol · 2025
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85/100
DeepRNA-Reg: a deep-learning based approach for comparative analysis of CLIP experiments.
PMID 41055236 · RNA Biol · 2025
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100/100
Genomics Define Malignant Transformation in Myeloma Precursor Conditions.
PMID 41061199 · J Clin Oncol · 2025
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Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation.
PMID 41039608 · Genome Med · 2025
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A Meta-Analysis of the Effects of Acute Sleep Deprivation on the Cortical Transcriptome in Rodent Models.
PMID 41031900 · J Sleep Res · 2025
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Tumor-specific but immunosuppressive CD39+CD8+ T cells exhibit double-faceted roles in clear cell renal cell carci
PMID 40961944 · Cell Rep Med · 2025
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The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository.
PMID 40926267 · Genome Biol · 2025
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Enhanced Generalizability of RNA Secondary Structure Prediction via Convolutional Block Attention Network and Ensemble Learning.
PMID 40871599 · Molecules · 2025
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87/100
randPedPCA: rapid approximation of principal components from large pedigrees.
PMID 40877802 · Genet Sel Evol · 2025
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Identification of Key Differentially Expressed Genes in Arabidopsis thaliana Under Short- and Long-Term High Light Stress.
PMID 40869111 · Int J Mol Sci · 2025
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Multi-omic identification of perineurial hyperplasia and lipid-associated nerve macrophages in human polyneuropathies.
PMID 40849297 · Nat Commun · 2025
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Chemist: A Domain-Specific Language by Chemists for Chemists.
PMID 40815845 · J Phys Chem A · 2025
89/100
Precise modulation of BRG1 levels reveals features of mSWI/SNF dosage sensitivity.
PMID 40846763 · Nat Genet · 2025
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Cell type differences in human cytomegalovirus transcription and epigenetic regulation with insights into major immediate-early enhancer-promoter control.
PMID 40758707 · PLoS Pathog · 2025
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Metabolic reprogramming and prognostic insights in molecular landscapes driven by glycolysis in ovarian cancer.
PMID 40707588 · Sci Rep · 2025
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Transcriptome-Proteome Profiling in Burkholderia thailandensis during the Transition from Exponential to Stationary Phase.
PMID 40680064 · J Proteome Res · 2025
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Single-cell RNA-sequencing highlights a curtailed NK cell function in convalescent COVID-19 pregnant women.
PMID 40661959 · Front Immunol · 2025
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87/100
Improving genomic prediction accuracy for methane emission and feed efficiency in sheep: integrating rumen microbial PCA with host genomic variation using neura
PMID 40676527 · Genet Sel Evol · 2025
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Gut-derived Lactobacillus from exceptional responders mitigates chemoradiotherapy-induced intestinal injury through methionine-driven epigene⚑
PMID 40469520 · Imeta · 2025
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89/100
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An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying SFPQ-TFE3 driven translocation RCC.
PMID 40463960 · iScience · 2025
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Elucidating the Prognostic and Therapeutic Implications of Insulin Resistance Genes in Breast Cancer: A Machine Learning-Powered Analysis.
PMID 40427728 · Biology (Basel) · 2025
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84/100
Genomic profiling of Streptococcus agalactiae (Group B Streptococcus) isolates from pregnant women in northeastern Mexico:
PMID 40416609 · PeerJ · 2025
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ChIP-seq Data Processing and Relative and Quantitative Signal Normalization for Saccharomyces cerevisiae.
PMID 40364978 · Bio Protoc · 2025
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Synthesis of transcriptomic studies reveals a core response to heat stress in abalone (genus Haliotis).
PMID 40361012 · BMC Genomics · 2025
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Integrated bioinformatics analysis screened the key genes and pathways of idiopathic pulmonary fibrosis.
PMID 40280949 · Sci Rep · 2025
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The Drosophila estrogen-related receptor promotes triglyceride storage within the larval fat body.
PMID 40288680 · J Lipid Res · 2025
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Protocol for assessing regulatory elements in murine heart using an AAV9-based massively parallel reporter assay.
PMID 40252222 · STAR Protoc · 2025
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GRAMD1B is a regulator of lipid homeostasis, autophagic flux and phosphorylated tau.
PMID 40204713 · Nat Commun · 2025
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GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets.⚑
PMID 40208796 · Gigascience · 2025
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SIRE 2.0: a novel method for estimating polygenic host effects underlying infectious disease transmission, and analytical expressions for prediction accuracies.
PMID 40169992 · Genet Sel Evol · 2025
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Hypoxia-associated genes as predictors of outcomes in gastric cancer: a genomic approach.
PMID 40129974 · Front Immunol · 2025
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96/100
scSAMAC: saliency-adjusted masking induced attention contrastive learning for single-cell clustering.
PMID 40131310 · Brief Bioinform · 2025
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85/100
Mouse-Geneformer: A deep learning model for mouse single-cell transcriptome and its cross-species utility.
PMID 40106407 · PLoS Genet · 2025
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Deubiquitination enzyme USP35 negatively regulates MAVS signaling to inhibit anti-tumor immunity.
PMID 40016186 · Cell Death Dis · 2025
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7SL RNA and signal recognition particle orchestrate a global cellular response to acute thermal stress.
PMID 39952919 · Nat Commun · 2025
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Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits.
PMID 39901160 · Genome Biol · 2025
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86/100
Single-Cell Hi-C Technologies and Computational Data Analysis.
PMID 39887949 · Adv Sci (Weinh) · 2025
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Revealing the critical state and identifying individualized dynamic network biomarker for type 2 diabetes through advanced analysis methods on individual basis.
PMID 39890881 · Sci Rep · 2025
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Monocytes serve as Shiga toxin carriers during the development of hemolytic uremic syndrome.
PMID 39871175 · Cell Mol Biol Lett · 2025
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Multiomic machine learning on lactylation for molecular typing and prognosis of lung adenocarcinoma.
PMID 39856156 · Sci Rep · 2025
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83/100
Correcting scale distortion in RNA sequencing data.
PMID 39875825 · BMC Bioinformatics · 2025
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Exploration of the shared diagnostic genes and molecular mechanism between obesity and atherosclerosis via bioinformatic analysis.
PMID 39825072 · Sci Rep · 2025
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76/100
Enhancing chemotherapy response prediction via matched colorectal tumor-organoid gene expression analysis and network-based biomarker selection.
PMID 39754813 · Transl Oncol · 2025
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78/100
Spns1-dependent endocardial lysosomal function drives valve morphogenesis through Notch1-signaling.
PMID 39720516 · iScience · 2024
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78/100
Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life.
PMID 39592593 · Nat Commun · 2024
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Comprehensive analysis of transcriptomics and radiomics revealed the potential of TEDC2 as a diagnostic marker for lung adenocarcinoma.
PMID 39553728 · PeerJ · 2024
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Charting and probing the activity of ADARs in human development and cell-fate specification.
PMID 39537590 · Nat Commun · 2024
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Protocol for the generation of single-nuclei RNA-seq libraries and quantification of heterogeneous cell types activated during social interaction.
PMID 39423127 · STAR Protoc · 2024
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