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31 matching publication(s)
Deep transcriptomics reveals cell-specific isoforms of pan-neuronal genes.
PMID 40379625 · Nat Commun · 2025
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84/100
Enhancing cell subpopulation discovery in cancer by integrating single-cell transcriptome and expressed variants.
PMID 41647537 · Fundam Res · 2025
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68/100
Integrative analysis of transcriptomic data reveals a predictive gene signature for chemoradiotherapy response in rectal cancer.
PMID 41550766 · iScience · 2025
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50/100
DAGFormer: A graph-based domain adaptation approach for single-cell cancer drug response prediction.
PMID 41417875 · PLoS Comput Biol · 2025
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No data access
Integrated analysis of post-transcriptional regulations reveals insights into acute myeloid leukemia.⚑
PMID 41407883 · Commun Biol · 2025
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32/100
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Widespread mono- and oligoadenylation direct small noncoding RNA maturation versus degradation fates.
PMID 41350938 · EMBO J · 2025
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78/100
Protocol for transcriptomic and epigenomic analysis of JAK inhibitor sensitivity in IFN-γ-primed human macrophages using ATAC-seq and RNA-seq.
PMID 41313685 · STAR Protoc · 2025
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85/100
Network Controllability Reveals Key Mitigation Points for Tumor-Promoting Signaling in Tumor-Educated Platelets.
PMID 41226816 · Int J Mol Sci · 2025
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84/100
Allele-specific immune gene quantification and expression analysis in single-cell RNA-seq data.
PMID 41229397 · NAR Genom Bioinform · 2025
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75/100
DeepRNA-Reg: a deep-learning based approach for comparative analysis of CLIP experiments.
PMID 41055236 · RNA Biol · 2025
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100/100
Generative and integrative modeling for transcriptomics with formalin fixed paraffin embedded material.
PMID 41029822 · J Transl Med · 2025
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67/100
Developing a thyroid cancer differentiation state classification system using deep residual networks and metabolic signature profiling.⚑
PMID 40993300 · NPJ Digit Med · 2025
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No data access
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Identification of Key Differentially Expressed Genes in Arabidopsis thaliana Under Short- and Long-Term High Light Stress.
PMID 40869111 · Int J Mol Sci · 2025
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75/100
Interpretable and integrative analysis of single-cell multiomics with scMKL.
PMID 40770488 · Commun Biol · 2025
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65/100
CanCellCap: robust cancer cell capture across tissue types on single-cell RNA-seq data by multi-domain learning.
PMID 40739511 · BMC Biol · 2025
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42/100
Metabolic reprogramming and prognostic insights in molecular landscapes driven by glycolysis in ovarian cancer.
PMID 40707588 · Sci Rep · 2025
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77/100
Improved epigenetic age prediction models by combining sex chromosome and autosomal markers.
PMID 40665390 · Epigenetics Chromatin · 2025
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48/100
Integrative transcriptomics and single-cell transcriptomics analyses reveal potential biomarkers and mechanisms of action in papillary thyroid carcinoma.
PMID 40520228 · Front Genet · 2025
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49/100
Comprehensive bioinformatics analysis and experimental verification identify mitochondrial gene Dgat2 as a novel therapeutic biomarker for myocardial ischemia-r
PMID 40510478 · Front Endocrinol (Lausanne) · 2025
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64/100
scATD: a high-throughput and interpretable framework for single-cell cancer drug resistance prediction and biomarker identification.
PMID 40501071 · Brief Bioinform · 2025
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62/100
ChIP-seq Data Processing and Relative and Quantitative Signal Normalization for Saccharomyces cerevisiae.
PMID 40364978 · Bio Protoc · 2025
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100/100
Integrated bioinformatics analysis screened the key genes and pathways of idiopathic pulmonary fibrosis.
PMID 40280949 · Sci Rep · 2025
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93/100
Protocol for assessing regulatory elements in murine heart using an AAV9-based massively parallel reporter assay.
PMID 40252222 · STAR Protoc · 2025
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93/100
Dynamic Gene Attention Focus (DyGAF): Enhancing Biomarker Identification Through Dual-Model Attention Networks.⚑
PMID 40160891 · Bioinform Biol Insights · 2025
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44/100
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Mouse-Geneformer: A deep learning model for mouse single-cell transcriptome and its cross-species utility.
PMID 40106407 · PLoS Genet · 2025
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95/100
Data-driven projections of candidate enhancer-activating SNPs in immune regulation.
PMID 40011812 · BMC Genomics · 2025
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57/100
Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits.
PMID 39901160 · Genome Biol · 2025
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86/100
Revealing the critical state and identifying individualized dynamic network biomarker for type 2 diabetes through advanced analysis methods on individual basis.
PMID 39890881 · Sci Rep · 2025
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75/100
Multiomic machine learning on lactylation for molecular typing and prognosis of lung adenocarcinoma.
PMID 39856156 · Sci Rep · 2025
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83/100
Exploration of the shared diagnostic genes and molecular mechanism between obesity and atherosclerosis via bioinformatic analysis.
PMID 39825072 · Sci Rep · 2025
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76/100
Identification and validation of a metabolic-related gene risk model predicting the prognosis of lung, colon, and breast cancers.
PMID 39779736 · Sci Rep · 2025
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74/100