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78 matching publication(s)

Publication	Journal	Year	Score	Verdict
Integrated omics in Drosophila uncover a circadian kinome. PMID 32483184	Nat Commun	2020	98	L1 98/100
An NMF-Based Methodology for Selecting Biomarkers in the Landscape of Genes of Heterogeneous Cancer-Associated Fibroblast Populations. PMID 32425511	Bioinform Biol Insights	2020	84	L1 84/100
The liver as an immunological barrier redefined by single-cell analysis. PMID 32176810	Immunology	2020	100	L1 100/100
Equivalent change enrichment analysis: assessing equivalent and inverse change in biological pathways between diverse experiments. ⚑ PMID 32093613	BMC Genomics	2020	62	L1 62/100 ⚑
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community. ⚑ PMID 32019831	mSystems	2020	57	L1 57/100 ⚑
All of gene expression (AOE): An integrated index for public gene expression databases. ⚑ PMID 31978081	PLoS One	2020	—	not yet assessed
PulmonDB: a curated lung disease gene expression database. ⚑ PMID 31949184	Sci Rep	2020	53	L1 53/100 ⚑
Computational modeling demonstrates that glioblastoma cells can survive spatial environmental challenges through exploratory adaptation. PMID 31836713	Nat Commun	2019	100	L1 100/100
Structure of the intergenic spacers in chicken ribosomal DNA. PMID 31655542	Genet Sel Evol	2019	80	L1 80/100
Eye in a Disk: eyeIntegration Human Pan-Eye and Body Transcriptome Database Version 1.0. PMID 31343654	Invest Ophthalmol Vis Sci	2019	94	L1 94/100
Wx: a neural network-based feature selection algorithm for transcriptomic data. PMID 31324856	Sci Rep	2019	50	L1 50/100
Comparing time series transcriptome data between plants using a network module finding algorithm. PMID 31164912	Plant Methods	2019	59	L1 59/100
Predicting enhancers in mammalian genomes using supervised hidden Markov models. PMID 30917778	BMC Bioinformatics	2019	70	L1 70/100
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing. PMID 30744683	Genome Biol	2019	97	L1 97/100
Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus. PMID 30303955	PLoS Negl Trop Dis	2018	94	L1 94/100
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells. PMID 29921844	Nat Commun	2018	96	L1 96/100
Whole genome and transcriptome maps of the entirely black native Korean chicken breed Yeonsan Ogye. PMID 30010758	Gigascience	2018	91	L1 91/100
MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data. PMID 29901703	Gigascience	2018	95	L1 95/100
De novo transcriptomic analysis of leaf and fruit tissue of Cornus officinalis using Illumina platform. ⚑ PMID 29451882	PLoS One	2018	45	L1 45/100 ⚑
Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples. ⚑ PMID 29221171	Oncotarget	2017	73	73/100 ⚑
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding. PMID 28398514	Nucleic Acids Res	2017	77	L1 77/100
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study. PMID 27583132	F1000Res	2016	74	L1 74/100
AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression. PMID 27082953	PLoS Comput Biol	2016	88	L1 88/100
Integrative analyses reveal signaling pathways underlying familial breast cancer susceptibility. PMID 26969729	Mol Syst Biol	2016	67	L1 67/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
A Deluge of Complex Repeats: The Solanum Genome. PMID 26241045	PLoS One	2015	94	L1 94/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100
Ribosome A and P sites revealed by length analysis of ribosome profiling data. PMID 25805170	Nucleic Acids Res	2015	81	L1 81/100