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39 matching publication(s)

Publication	Journal	Year	Score	Verdict
Statistical framework for calling allelic imbalance in high-throughput sequencing data. PMID 39966391	Nat Commun	2025	89	L1 89/100
Comprehensive data for studying serum exosome microRNA transcriptome in Parkinson's disease patients. PMID 39406833	Sci Data	2024	100	L1 100/100
De novo identification of CD4+ T cell epitopes. PMID 38658646	Nat Methods	2024	83	L1 83/100
Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in DSRCTs. PMID 38781959	Cell Rep Med	2024	76	L1 76/100
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. PMID 38600112	Nat Commun	2024	93	L1 93/100
Decoding and reconstructing disease relations between dry eye and depression: a multimodal investigation comprising meta-analysis, genetic pathways and Mendelia PMID 38548265	J Adv Res	2024	79	L1 79/100
Benefit of using interaction effects for the analysis of high-dimensional time-response or dose-response data for two-group comparisons. PMID 38012163	Sci Rep	2023	92	L1 92/100
Hierarchical classification-based pan-cancer methylation analysis to classify primary cancer. PMID 38066424	BMC Bioinformatics	2023	83	L1 83/100
Interpretable prediction models for widespread m6A RNA modification across cell lines and tissues. PMID 37995291	Bioinformatics	2023	79	L1 79/100
TransOrGAN: An Artificial Intelligence Mapping of Rat Transcriptomic Profiles between Organs, Ages, and Sexes. PMID 37200521	Chem Res Toxicol	2023	84	L1 84/100
Optimisation of the core subset for the APY approximation of genomic relationships. PMID 36418945	Genet Sel Evol	2022	85	L1 85/100
An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis. PMID 36352408	BMC Biol	2022	84	L1 84/100
Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle. PMID 36057548	Genet Sel Evol	2022	90	L1 90/100
Identification of phenotype-specific networks from paired gene expression-cell shape imaging data. PMID 35197309	Genome Res	2022	100	L1 100/100
Integrated Analysis of Multiple Microarrays Based on Raw Data Identified Novel Gene Signatures in Recurrent Implantation Failure. PMID 35197930	Front Endocrinol (Lausanne)	2022	85	L1 85/100
Transcriptomic-Based Quantification of the Epithelial-Hybrid-Mesenchymal Spectrum across Biological Contexts. PMID 35053177	Biomolecules	2021	100	L1 100/100
A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer. PMID 35047825	NAR Cancer	2022	100	L1 100/100
Molecular Classification Models for Triple Negative Breast Cancer Subtype Using Machine Learning. PMID 34575658	J Pers Med	2021	86	L1 86/100
Identification and analysis of genes associated with epithelial ovarian cancer by integrated bioinformatics methods. PMID 34143800	PLoS One	2021	75	L1 75/100
TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining. PMID 33705981	Genomics Proteomics Bioinformatics	2021	79	L1 79/100
A Meta-Analysis of Wolbachia Transcriptomics Reveals a Stage-Specific Wolbachia Transcriptional Response Shared Across Different Hosts. ⚑ PMID 32718933	G3 (Bethesda)	2020	89	L1 89/100 ⚑
Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality. PMID 32681306	Curr Genet	2020	81	L1 81/100
Integrated omics in Drosophila uncover a circadian kinome. PMID 32483184	Nat Commun	2020	98	L1 98/100
An NMF-Based Methodology for Selecting Biomarkers in the Landscape of Genes of Heterogeneous Cancer-Associated Fibroblast Populations. PMID 32425511	Bioinform Biol Insights	2020	84	L1 84/100
The liver as an immunological barrier redefined by single-cell analysis. PMID 32176810	Immunology	2020	100	L1 100/100
Computational modeling demonstrates that glioblastoma cells can survive spatial environmental challenges through exploratory adaptation. PMID 31836713	Nat Commun	2019	100	L1 100/100
Structure of the intergenic spacers in chicken ribosomal DNA. PMID 31655542	Genet Sel Evol	2019	80	L1 80/100
Eye in a Disk: eyeIntegration Human Pan-Eye and Body Transcriptome Database Version 1.0. PMID 31343654	Invest Ophthalmol Vis Sci	2019	94	L1 94/100
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing. PMID 30744683	Genome Biol	2019	97	L1 97/100
Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus. PMID 30303955	PLoS Negl Trop Dis	2018	94	L1 94/100
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells. PMID 29921844	Nat Commun	2018	96	L1 96/100
Whole genome and transcriptome maps of the entirely black native Korean chicken breed Yeonsan Ogye. PMID 30010758	Gigascience	2018	91	L1 91/100
MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data. PMID 29901703	Gigascience	2018	95	L1 95/100
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding. PMID 28398514	Nucleic Acids Res	2017	77	L1 77/100
AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression. PMID 27082953	PLoS Comput Biol	2016	88	L1 88/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
A Deluge of Complex Repeats: The Solanum Genome. PMID 26241045	PLoS One	2015	94	L1 94/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100
Ribosome A and P sites revealed by length analysis of ribosome profiling data. PMID 25805170	Nucleic Acids Res	2015	81	L1 81/100