Sally James

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

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How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• Candidates for Balancing Selection in Leishmania donovani Complex Parasites.
  2021 L1 64/100

1 assessed by us (0 reproduced) · 90 not yet assessed — every PubMed paper on record, linked below.

• Parallel evolution of plant alkaloid biosynthesis from bacterial‐like decarboxylases ↗

  New Phytologist · 2026 · PMID 41530990
  not yet assessed
• Parallel evolution of plant alkaloid biosynthesis from bacterial-like decarboxylases

  White Rose Research Online (University of Leeds, The University of Sheffield, University of York) · 2026
  not yet assessed
• Ontogeny independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis ↗

  Communications Biology · 2026 · PMID 41862629
  not yet assessed
• Author Reply to Peer Reviews of An ERα-Dependent Hypoxia Response Defines EMT-Adjacent Tumour Regions and Suppresses the Pro-survival Effects of Amiloride in Estrogen Receptor-Positive Breast Cancer ↗

  2026
  not yet assessed
• Bi-directional highways and super-seeder tissues underpin parasite dissemination in experimental Leishmania donovani infection ↗

  Nature Communications · 2026
  not yet assessed
• Sex-specific lymphoid lineage differentiation is modulated by CIZ1 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• Virus-induced APOBEC3 transmutagenesis in bladder cancer initiation ↗

  Science Advances · 2025 · PMID 41337590
  not yet assessed
• IL-32–producing CD8+ memory T cells define immunoregulatory niches in human cutaneous leishmaniasis ↗

  Journal of Clinical Investigation · 2025 · PMID 40371647
  not yet assessed
• Fraxinus excelsior updated long-read genome reveals the importance of MADS-box genes in tolerance mechanisms against ash dieback ↗

  G3 Genes Genomes Genetics · 2025 · PMID 40112044
  not yet assessed
• Discovery and characterisation of terpenoid biosynthesis enzymes from Daphniphyllum macropodum ↗

  BMC Plant Biology · 2025 · PMID 40241013
  not yet assessed
• Assembly and annotation of Solanum dulcamara and Solanum nigrum plant genomes, two nightshades with contrasting susceptibilities to Ralstonia solanacearum ↗

  G3 Genes Genomes Genetics · 2025 · PMID 40418738
  not yet assessed
• Assembly and annotation of Solanum dulcamara and Solanum nigrum plant genomes, two nightshades with different susceptibilities to Ralstonia solanacearum ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• An ERα-Dependent Hypoxia Response Defines EMT-Adjacent Tumour Regions and Suppresses the Pro-survival Effects of Amiloride in Estrogen Receptor-Positive Breast Cancer ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Bi-directional highways and super-seeder tissues underpin parasite dissemination in experimental visceral leishmaniasis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Variation of terpene alkaloids in Daphniphyllum macropodum across plants and tissues ↗

  New Phytologist · 2024 · PMID 38757546
  not yet assessed
• Effects of Azithromycin on Blood Inflammatory Gene Expression and Cytokine Production in Sarcoidosis ↗

  Lung · 2024 · PMID 39284999
  not yet assessed
• Antigenic epitope targets of rhesus macaques self-curing from Schistosoma mansoni infection ↗

  Frontiers in Immunology · 2024 · PMID 38464672
  not yet assessed
• Pseudomolecule-scale genome assemblies of Drepanocaryum sewerzowii and Marmoritis complanata ↗

  G3 Genes Genomes Genetics · 2024 · PMID 39047060
  not yet assessed
• IL-32 producing CD8 + memory T cells and Tregs define the IDO1 / PD-L1 niche in human cutaneous leishmaniasis skin lesions ↗

  medRxiv · 2024
  not yet assessed
• Parallel evolution of plant alkaloid biosynthesis from bacterial-like decarboxylases ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Genome Report: Pseudomolecule-scale genome assemblies of Drepanocaryum sewerzowii and Marmoritis complanata ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• The rhythmic transcriptional landscape in Caenorhabditis elegans : daily, circadian and novel 16-hour cycling gene expression revealed by RNA-sequencing ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Genome Assembly and Annotation of Vietnamese Rice Lines with Diverse Life-Cycle Durations ↗

  DNA · 2024
  not yet assessed
• Fraxinus excelsior updated long-read genome reveals the importance of MADS-box genes in tolerance mechanisms against ash dieback ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Whole genome structural predictions reveal hidden diversity in putative oxidative enzymes of the lignocellulose-degrading ascomycete Parascedosporium putredinis NO1 ↗

  Microbiology Spectrum · 2023 · PMID 37811978
  not yet assessed
• Identification of a protein expression signature distinguishing early from organising diffuse alveolar damage in COVID-19 patients ↗

  Journal of Clinical Pathology · 2023 · PMID 36894313
  not yet assessed
• UVB modifies skin immune-stroma cross-talk and promotes effector T cell recruitment during cryptic Leishmania donovani infection ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023
  not yet assessed
• Whole genome structural predictions reveal hidden diversity in putative oxidative enzymes of the lignocellulose degrading ascomycete Parascedosporium putredinis NO1 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023
  not yet assessed
• CD317-Positive Immune Stromal Cells in Human “Mesenchymal Stem Cell” Populations ↗

  Frontiers in Immunology · 2022 · PMID 35734183
  not yet assessed
• Endosomal cargo recycling mediated by Gpa1 and phosphatidylinositol 3-kinase is inhibited by glucose starvation ↗

  Molecular Biology of the Cell · 2022 · PMID 35080991
  not yet assessed
• Comparisons between Complete Genomes of the Eukaryotic Extremophile Galdieria sulphuraria Reveals Complex Nuclear Chromosomal Structures ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Corrigendum: CD317-Positive Immune Stromal Cells in Human “Mesenchymal Stem Cell” Populations ↗

  Frontiers in Immunology · 2022 · PMID 36582232
  not yet assessed
• Identification of CD317-Positive Pro-inflammatory Immune Stromal Cells in Human Mesenchymal Stromal Cell Preparations ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Resolving Complexities in Taxonomic Lineages of the Organellar and Nuclear Genomes of Galdieria through Comparative Phylogenomic Analysis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Identification of a protein expression signature distinguishing early from organising diffuse alveolar damage in COVID-19 patients ↗

  medRxiv · 2022
  not yet assessed
• Integrated miRNA/cytokine/chemokine profiling reveals severity-associated step changes and principal correlates of fatality in COVID-19 ↗

  iScience · 2021 · PMID 34957382
  not yet assessed
• Superoxide is promoted by sucrose and affects amplitude of circadian rhythms in the evening ↗

  Proceedings of the National Academy of Sciences · 2021 · PMID 33674383
  not yet assessed
• Candidates for Balancing Selection inLeishmania donovaniComplex Parasites

  Genome Biology and Evolution · 2021 · PMID 34865011
  L1 64/100
• Endosomal cargo recycling mediated by Gpa1 and Phosphatidylinositol-3-Kinase is inhibited by glucose starvation ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Integrated miRNA/Cytokine/Chemokine Profiling Reveals Severity-Associated Step Changes and Principal Correlates of Fatality in COVID-19 ↗

  SSRN Electronic Journal · 2021
  not yet assessed
• Multiple targets of balancing selection in Leishmania donovani complex parasites ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Integrated miRNA/cytokine/chemokine profiling reveals immunopathological step changes associated with COVID-19 severity ↗

  medRxiv · 2021
  not yet assessed
• Chromosomal assembly of the nuclear genome of the endosymbiont-bearing trypanosomatid Angomonas deanei ↗

  G3 Genes Genomes Genetics · 2020 · PMID 33561222
  not yet assessed
• Refugees and Conflict-Affected People: Integrating Displaced Communities into Food Systems ↗

  2020
  not yet assessed
• Enriched osteogenic potential of CD317-negative mesenchymal stromal cell populations in vitro and in vivo ↗

  Bone Reports · 2020
  not yet assessed
• Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis ↗

  Wellcome Open Research · 2019 · PMID 30542664
  not yet assessed
• Tissue-specific transcriptomic changes associated with AmBisome® treatment of BALB/c mice with experimental visceral leishmaniasis ↗

  Wellcome Open Research · 2019 · PMID 31976381
  not yet assessed
• Incidence and outcome of takotsubo syndrome compared to acute myocardial infarction, in men versus women

  European Journal of Heart Failure · 2019
  not yet assessed
• Regional differences in the incidence and prognosis of the takotsubo syndrome

  European Journal of Heart Failure · 2019
  not yet assessed
• Incidence and prognosis of the takotsubo syndrome compared to acute myocardial infarction

  European Journal of Heart Failure · 2019
  not yet assessed
• Regional differences in the incidence and outcome of acute ischemic heart failure after ST-elevation myocardial infarction in Sweden

  European Journal of Heart Failure · 2019
  not yet assessed
• Subtype-specific regulatory network rewiring in acute myeloid leukemia ↗

  Nature Genetics · 2018 · PMID 30420649
  not yet assessed
• Epidermal growth factor can signal via β-catenin to control proliferation of mesenchymal stem cells independently of canonical Wnt signalling ↗

  Cellular Signalling · 2018 · PMID 30287279
  not yet assessed
• Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis ↗

  Wellcome Open Research · 2018
  not yet assessed
• Microexon gene transcriptional profiles and evolution provide insights into blood processing by the Schistosoma japonicum esophagus ↗

  PLoS neglected tropical diseases · 2018 · PMID 29432451
  not yet assessed
• Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis [version 2; referees : 4 approved]

  White Rose Research Online (University of Leeds, The University of Sheffield, University of York) · 2018
  not yet assessed
• P3641Predicting one year mortality and heart failure with artificial intelligence after a myocardial infarction ↗

  European Heart Journal · 2018
  not yet assessed
• Using MinION nanopore sequencing to generate a de novo eukaryotic draft genome: preliminary physiological and genomic description of the extremophilic red alga Galdieria sulphuraria strain SAG 107.79 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2016
  not yet assessed
• Multiparameter Analysis of Human Bone Marrow Stromal Cells Identifies Distinct Immunomodulatory and Differentiation-Competent Subtypes ↗

  Stem Cell Reports · 2015 · PMID 26070611
  not yet assessed
• Chronic FLT3-ITD Signaling in Acute Myeloid Leukemia Is Connected to a Specific Chromatin Signature ↗

  Cell Reports · 2015 · PMID 26212328
  not yet assessed
• Human cell dedifferentiation in mesenchymal condensates through controlled autophagy ↗

  Scientific Reports · 2015 · PMID 26290392
  not yet assessed
• The Schistosome Esophagus Is a ‘Hotspot’ for Microexon and Lysosomal Hydrolase Gene Expression: Implications for Blood Processing ↗

  PLoS neglected tropical diseases · 2015 · PMID 26642053
  not yet assessed
• Identification of a Dynamic Core Transcriptional Network in t(8;21) AML that Regulates Differentiation Block and Self-Renewal ↗

  Cell Reports · 2014 · PMID 25242324
  not yet assessed
• Identification of a Dynamic Core Transcriptional Network in t(8;21) AML Regulating Differentiation Block and Self-Renewal ↗

  Blood · 2014
  not yet assessed
• Declined Presentation ↗

  Experimental Hematology · 2014
  not yet assessed
• Prior epigenetic priming of cytokine genes in naive T cells is required for their subsequent activation by inducible enhancers ↗

  Epigenetics & Chromatin · 2013
  not yet assessed
• Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding ↗

  Leukemia · 2012 · PMID 22343733
  not yet assessed
• Induction of differentiation and apoptosis in leukaemic cell lines by the novel benzamide family histone deacetylase 2 and 3 inhibitor MI-192 ↗

  Leukemia Research · 2012 · PMID 22818799
  not yet assessed
• The Inducible Tissue-Specific Expression of the Human IL-3/GM-CSF Locus Is Controlled by a Complex Array of Developmentally Regulated Enhancers ↗

  The Journal of Immunology · 2012 · PMID 23024272
  not yet assessed
• Mesenchymal Stem Cells: The Role of Endothelial Cells and the Vasculature ↗

  Stem cells and cancer stem cells · 2012
  not yet assessed
• The Human IL-3/Granulocyte-Macrophage Colony-Stimulating Factor Locus Is Epigenetically Silent in Immature Thymocytes and Is Progressively Activated during T Cell Development ↗

  The Journal of Immunology · 2010 · PMID 20147630
  not yet assessed
• The Effects of Acute Triiodothyronine Therapy on Myocardial Gene Expression in Brain Stem Dead Cardiac Donors ↗

  The Journal of Clinical Endocrinology & Metabolism · 2010 · PMID 20080850
  not yet assessed
• Transcriptional and epigenetic regulation of the GM-CSF promoter by RUNX1 ↗

  Leukemia Research · 2010 · PMID 20439113
  not yet assessed
• N-terminal pro-brain-type natriuretic peptide: a biochemical surrogate of cardiac function in the potential heart donor☆☆☆ ↗

  European Journal of Cardio-Thoracic Surgery · 2010 · PMID 20181489
  not yet assessed
• A novel mechanism of sodium iodide symporter repression in differentiated thyroid cancer ↗

  Journal of Cell Science · 2009 · PMID 19706688
  not yet assessed
• 347: The Effect of Tri-Iodothyronine (T3) on Thyroid Hormone Responsive Cardiac Genes in the Brain Stem Dead Cardiac Donor ↗

  The Journal of Heart and Lung Transplantation · 2009
  not yet assessed
• PBF-mediated alteration of sodium iodide symporter localisation and activity in differentiated thyroid cancer

  Society for Endocrinology BES 2009 · 2009
  not yet assessed
• Modified cell cycle status in a mouse model of altered neuronal vulnerability (slow Wallerian degeneration; Wld s ) ↗

  Genome biology · 2008 · PMID 18570652
  not yet assessed
• Monocarboxylate Transporter 8 in Neuronal Cell Growth ↗

  Endocrinology · 2008 · PMID 19022891
  not yet assessed
• The dose-dependant increase of ALP activity in human multipotent mesenchymal stromal cells after treatment with soybean extract.

  2008
  not yet assessed
• Expression of thyroid hormone transporters in the human fetal cerebral cortex

  Society for Endocrinology BES 2008 · 2008
  not yet assessed
• A novel mechanism of NIS repression in differentiated thyroid cancer

  Society for Endocrinology BES 2008 · 2008
  not yet assessed
• Placental transport of thyroid hormone ↗

  Best Practice & Research Clinical Endocrinology & Metabolism · 2007 · PMID 17574007
  not yet assessed
• Monocarboxylate transporter 8 (MCT8) represses proliferation of fetal embryonal NT2 and placental JEG-3 cells in vitro

  Society for Endocrinology BES · 2007
  not yet assessed
• The sodium iodide symporter (NIS) is repressed by PTTG via the human NIS upstream enhancer (hNUE)

  Society for Endocrinology BES · 2007
  not yet assessed
• Conditional and inducible gene recombineering in the mouse inner ear ↗

  Brain Research · 2006 · PMID 16488403
  not yet assessed
• How Does Glucose Insulin Potassium Improve Hemodynamic Performance? ↗

  Circulation · 2006 · PMID 16820579
  not yet assessed
• Development and Evaluation of a Pilot Scale Atmospheric Steam Treatment Cabinet ↗

  2006
  not yet assessed
• Liver estradiol metabolism in rhesus monkeys with and without endometriosis and dioxin exposure ↗

  Fertility and Sterility · 2002
  not yet assessed
• Effect of antilymphocytic serum on spontaneous dissemination of tumour cells (T).

  PubMed Central · 1970
  not yet assessed