Keunsoo Kang

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (5)

• Protocol for transcriptomic and epigenomic analysis of JAK inhibitor sensitivity in IFN-γ-primed human macrophages using ATAC-seq and RNA-seq.
  2025 L1 85/100
• Hierarchical cell-type identifier accurately distinguishes immune-cell subtypes enabling precise profiling of tissue microenvironment with single-cell RNA-seque
  2023 L1 94/100
• Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF.
  2022 L1 55/100
• Wx: a neural network-based feature selection algorithm for transcriptomic data.
  2019 L1 50/100
• Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data.
  2018 L1 68/100

5 assessed by us (2 reproduced) · 218 not yet assessed — every PubMed paper on record, linked below.

• Transcriptome-Based Epigenetic Screening identifies DNA Hypermethylation Signatures as Prognostic Biomarkers in Oral Squamous Cell Carcinoma ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2027
  not yet assessed
• Transcriptome-Based Epigenetic Screening identifies DNA Hypermethylation Signatures as Prognostic Biomarkers in Oral Squamous Cell Carcinoma ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2027
  not yet assessed
• Transcriptome-Based Epigenetic Screening identifies DNA Hypermethylation Signatures as Prognostic Biomarkers in Oral Squamous Cell Carcinoma ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2027
  not yet assessed
• Enhancer Trajectories in Lineage Commitment: Regulatory Logic of States and Cooperation ↗

  Biomolecules · 2026 · PMID 41594627
  not yet assessed
• Single‐Nucleus Multi‐Omics Reveals Hypoxia‐Driven Angiogenic Programs and Their Epigenetic Control in Sinonasal Squamous Cell Carcinoma ↗

  Advanced Science · 2026 · PMID 41498635
  not yet assessed
• ERAPID: an end‑to‑end RNA‑seq analysis pipeline for integrative candidate biomarker discovery with applications to neuropsychiatric disorders ↗

  Methods · 2026 · PMID 41500484
  not yet assessed
• Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil ↗

  The Catalogue of Life · 2026
  not yet assessed
• Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil ↗

  The Catalogue of Life · 2026
  not yet assessed
• A functional triangle relationship of topoisomerase IIβ, BARD1, and ERK2 in immediate early gene transcription ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• Goldnanowire integrated surface-enhanced Raman spectroscopy for multiplexed small extracellular vesicle analysis ↗

  Sensors and Actuators B Chemical · 2026
  not yet assessed
• Multi-omics study to elucidate molecular mechanism of polyhexamethylene guanidine phosphate (PHMG-p)-induced pulmonary damage in mice ↗

  Archives of Toxicology · 2026 · PMID 42259956
  not yet assessed
• DEGORA benchmark reproduction data: differential-expression tables and locked gold panels for four human stimulus-response programs (v1) ↗

  Open MIND · 2026
  not yet assessed
• DEGORA benchmark reproduction data: differential-expression tables and locked gold panels for four human stimulus-response programs, plus an Alzheimer's-disease published-DEG case study (v2) ↗

  Open MIND · 2026
  not yet assessed
• DEGORA benchmark reproduction data: differential-expression tables and locked gold panels for four human stimulus-response programs, plus an Alzheimer's-disease published-DEG case study (v2) ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Aberrant 3′UTR splicing drives FUS-dependent mRNA condensates and prevents β-catenin from adherens junctions to promote cancer aggressiveness ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• BRAID: RT-PCR-calibrated conformal intervals for splicing ΔPSI ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• MLHeatmap: an interactive application for transcriptomic marker-panel discovery ↗

  Bioinformatics Advances · 2026
  not yet assessed
• Hyaluronan network remodeling by ZEB1 and ITIH2 enhances the motility and invasiveness of cancer cells ↗

  Journal of Clinical Investigation · 2025 · PMID 40178908
  not yet assessed
• Epigenomic landscapes define differential Janus kinases inhibitor sensitivity in IFN-γ-primed human macrophages ↗

  iScience · 2025 · PMID 40491958
  not yet assessed
• A Novel RAGE Modulator Induces Soluble RAGE to Reduce BACE1 Expression in Alzheimer's Disease ↗

  Advanced Science · 2025 · PMID 39755927
  not yet assessed
• Adaptation responses to salt stress in the gut of <i>Poecilia reticulata</i> ↗

  Animal Cells and Systems · 2025 · PMID 39839657
  not yet assessed
• HELLS controls mitochondrial dynamics and genome stability in liver cancer by collusion with MIEF1 ↗

  Cell Death and Disease · 2025 · PMID 40175344
  not yet assessed
• Disruption of Thyroid and Sex Hormones, Lipid Metabolism, and Neurobehavior by Trioctyl Trimellitate (TOTM) in Larval and Adult Zebrafish ↗

  SSRN Electronic Journal · 2025
  not yet assessed
• A Novel RAGE Modulator Induces Soluble RAGE to Reduce BACE1 Expression in Alzheimer's Disease (Adv. Sci. 8/2025) ↗

  Advanced Science · 2025
  not yet assessed
• IFITM1 Influences Natural Killer Cell-Mediated Cytotoxicity by Modulation of HLA class I Expression in Triple-Negative Breast Cancer Cells ↗

  Cancer Research and Treatment · 2025 · PMID 40997930
  not yet assessed
• Abstract Wed107: Promoter hypomethylation in Cadherin-7 gene: a novel epigenetic marker related with cerebral small vessel disease ↗

  Circulation Research · 2025
  not yet assessed
• Disruption of Thyroid and Sex Hormones, Lipid Metabolism, and Neurobehavior by Trioctyl Trimellitate (TOTM) in Larval and Adult Zebrafish ↗

  SSRN Electronic Journal · 2025
  not yet assessed
• Protocol for transcriptomic and epigenomic analysis of JAK inhibitor sensitivity in IFN-γ-primed human macrophages using ATAC-seq and RNA-seq

  STAR Protocols · 2025 · PMID 41313685
  L1 85/100
• Dementia Prediction Using Hierarchical Attention and Evaluation of Context Quality ↗

  Alzheimer s & Dementia · 2025 · PMID 41447149
  not yet assessed
• ATAC-seq and RNA-seq Analysis Pipeline Scripts ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2025
  not yet assessed
• ATAC-seq and RNA-seq Analysis Pipeline Scripts ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2025
  not yet assessed
• Integration of epigenomic and transcriptomic profiling uncovers EZH2 target genes linked to cysteine metabolism in hepatocellular carcinoma ↗

  Cell Death and Disease · 2024 · PMID 39516467
  not yet assessed
• Glut3 promotes cellular O-GlcNAcylation as a distinctive tumor-supportive feature in Treg cells ↗

  Cellular and Molecular Immunology · 2024 · PMID 39468304
  not yet assessed
• Molecular genomic and epigenomic characteristics related to aspirin and clopidogrel resistance ↗

  BMC Medical Genomics · 2024 · PMID 38902747
  not yet assessed
• Epigenetic dysregulation of H19/IGF2 in hepatic cells exposed to toxic metal mixtures in vitro ↗

  Scientific Reports · 2024 · PMID 39592715
  not yet assessed
• Identification of DNA methylation biomarkers for evaluating cardiovascular disease risk from epigenome profiles altered by low-dose ionizing radiation ↗

  Clinical Epigenetics · 2024 · PMID 38303056
  not yet assessed
• Potential Prebiotic Effects of Artemisia capillaris-Derived Transglycosylated Product ↗

  Foods · 2024 · PMID 39456329
  not yet assessed
• Developmental self-reactivity determines pathogenic Tc17 differentiation potential of naive CD8+ T cells in murine models of inflammation ↗

  Nature Communications · 2024 · PMID 38575593
  not yet assessed
• Selective epigenetic regulation of IFN-γ signature genes by JAK inhibitor in inflammatory diseases ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Multi-omic profiling identifies malignant subpopulations and a hypoxia-driven angiogenic axis as therapeutic vulnerabilities in sinonasal squamous cell carcinoma ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Photobiomodulation improves the synapses and cognitive function and ameliorates epileptic seizure by inhibiting downregulation of Nlgn3 ↗

  Cell & Bioscience · 2023 · PMID 36635704
  not yet assessed
• ADAR1-dependent miR-3144-3p editing simultaneously induces MSI2 expression and suppresses SLC38A4 expression in liver cancer ↗

  Experimental & Molecular Medicine · 2023 · PMID 36599932
  not yet assessed
• Integrative mapping of the dog epigenome: Reference annotation for comparative intertissue and cross-species studies ↗

  Science Advances · 2023 · PMID 37406108
  not yet assessed
• Terminal fucosylation of haptoglobin in cancer-derived exosomes during cholangiocarcinoma progression ↗

  Frontiers in Oncology · 2023 · PMID 37168374
  not yet assessed
• Hypomethylation in MTNR1B: a novel epigenetic marker for atherosclerosis profiling using stenosis radiophenotype and blood inflammatory cells ↗

  Clinical Epigenetics · 2023 · PMID 36658621
  not yet assessed
• Hierarchical cell-type identifier accurately distinguishes immune-cell subtypes enabling precise profiling of tissue microenvironment with single-cell RNA-sequencing

  Briefings in Bioinformatics · 2023 · PMID 36681937
  L1 94/100
• RNA Editing Enzyme ADAR1 Suppresses the Mobility of Cancer Cells via ARPIN ↗

  Molecules and Cells · 2023 · PMID 36921992
  not yet assessed
• Autophagy and mitophagy-related extracellular mitochondrial dysfunction of cerebrospinal fluid cells in patients with hemorrhagic moyamoya disease ↗

  Scientific Reports · 2023 · PMID 37612316
  not yet assessed
• miR-199a and miR-199b facilitate diffuse gastric cancer progression by targeting Frizzled-6 ↗

  Scientific Reports · 2023 · PMID 37838767
  not yet assessed
• Low-Dose Radiation-Induced Transcriptomic Changes in Diabetic Aortic Endothelial Cells ↗

  Data · 2023
  not yet assessed
• MicroRNA Profiling of Fresh Lung Adenocarcinoma and Adjacent Normal Tissues from Ten Korean Patients Using miRNA-Seq ↗

  Data · 2023
  not yet assessed
• Corrigendum to: RNA Editing Enzyme ADAR1 Suppresses the Mobility of Cancer Cells via ARPIN ↗

  Molecules and Cells · 2023 · PMID 37968985
  not yet assessed
• Integrative mapping of the dog epigenome: reference annotation for comparative inter-tissue and cross-species studies ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2023
  not yet assessed
• Data from Nucleoporin 210 Serves a Key Scaffold for SMARCB1 in Liver Cancer ↗

  2023
  not yet assessed
• Supplementary Figures and Tables from Nucleoporin 210 Serves a Key Scaffold for SMARCB1 in Liver Cancer ↗

  2023
  not yet assessed
• Supplementary Figures and Tables from Nucleoporin 210 Serves a Key Scaffold for SMARCB1 in Liver Cancer ↗

  2023
  not yet assessed
• Abstract 2165: Identification and characterization of Karyopherin α2 (KPNA2), a member of the nucleocytoplasmic transporter family, in lung cancer ↗

  Cancer Research · 2023
  not yet assessed
• Developmental self-reactivity determines the pathogenic Tc17 differentiation potential of naive CD8+ T cells by adjusting endogenous SMAD3 expression ↗

  Research Square · 2023
  not yet assessed
• Identification and characterization of karyopherin a-2, a nuclear export protein in lung adenocarcinoma. ↗

  Journal of Clinical Oncology · 2023
  not yet assessed
• Data from Nucleoporin 210 Serves a Key Scaffold for SMARCB1 in Liver Cancer ↗

  2023
  not yet assessed
• RANKL-responsive epigenetic mechanism reprograms macrophages into bone-resorbing osteoclasts ↗

  Cellular and Molecular Immunology · 2022 · PMID 36513810
  not yet assessed
• Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF

  Nature Communications · 2022 · PMID 35508485
  L1 55/100
• A Brief Review of Machine Learning-Based Bioactive Compound Research ↗

  Applied Sciences · 2022
  not yet assessed
• MarkerCount: A stable, count-based cell type identifier for single-cell RNA-seq experiments ↗

  Computational and Structural Biotechnology Journal · 2022 · PMID 35782735
  not yet assessed
• Identification and Characterization of Cancer-Associated Fibroblast Subpopulations in Lung Adenocarcinoma ↗

  Cancers · 2022 · PMID 35884546
  not yet assessed
• Chemically-induced osteogenic cells for bone tissue engineering and disease modeling ↗

  Biomaterials · 2022 · PMID 36116170
  not yet assessed
• ZEB1-regulated lnc-Nr2f1 promotes the migration and invasion of lung adenocarcinoma cells ↗

  Cancer Letters · 2022 · PMID 35176421
  not yet assessed
• Activation of OSM-STAT3 Epigenetically Regulates Tumor-Promoting Transcriptional Programs in Cervical Cancer ↗

  Cancers · 2022 · PMID 36551576
  not yet assessed
• Alu RNA induces NLRP3 expression through TLR7 activation in α-1-antitrypsin–deficient macrophages ↗

  JCI Insight · 2022 · PMID 35730566
  not yet assessed
• Esr1 but Not CYP19A1 Overexpression in Mammary Epithelial Cells during Reproductive Senescence Induces Pregnancy-Like Proliferative Mammary Disease Responsive to Anti-Hormonals ↗

  American Journal Of Pathology · 2022 · PMID 36464512
  not yet assessed
• Overexpression of Estrogen Receptor α in Mammary Glands of Aging Mice Is Associated with a Proliferative Risk Signature and Generation of Estrogen Receptor α–Positive Mammary Adenocarcinomas ↗

  American Journal Of Pathology · 2022 · PMID 36464513
  not yet assessed
• Characterization of transcriptome diversity and in vitro behavior of primary human high-risk breast cells ↗

  Scientific Reports · 2022 · PMID 35459280
  not yet assessed
• MicroRNA-769-3p Acts as a Prognostic Factor in Oral Squamous Cell Cancer by Modulating Stromal Genes ↗

  Cancers · 2022 · PMID 36139534
  not yet assessed
• Integrative mapping of the dog epigenome: reference annotation for comparative inter-tissue and cross-species studies ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Hierarchical cell-type identifier accurately distinguishes immune-cell subtypes enabling precise profiling of tissue microenvironment with single-cell RNA-sequencing ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Abstract LB043: Identification and characterization of cancer-associated fibroblast subpopulations in lung adenocarcinoma ↗

  Cancer Research · 2022
  not yet assessed
• ADAR1 promotes miR-3144-3p editing to simultaneously induce oncogenic MSI2 and suppress tumor suppressor SLC38A4 in liver cancer ↗

  Research Square · 2022
  not yet assessed
• ADAR1-dependent miR-3144-3p editing simultaneously induces MSI2 and suppresses SLC38A4 in liver cancer ↗

  Research Square · 2022
  not yet assessed
• Photobiomodulation upregulates neuroligin-3 and improves the synapses and cognitive function and ameliorates epileptic seizure ↗

  Research Square · 2022
  not yet assessed
• Corrigendum to “Chemically-induced osteogenic cells for bone tissue engineering and disease modeling” [Biomaterials 289 (2022) 121792] ↗

  Biomaterials · 2022 · PMID 36194957
  not yet assessed
• Cancer-associated fibroblasts activated by miR-196a promote the migration and invasion of lung cancer cells ↗

  Cancer Letters · 2021 · PMID 33775710
  not yet assessed
• Integrative Transcriptome Profiling Reveals SKA3 as a Novel Prognostic Marker in Non-Muscle Invasive Bladder Cancer ↗

  Cancers · 2021 · PMID 34572901
  not yet assessed
• SMARCA4 oncogenic potential via IRAK1 enhancer to activate Gankyrin and AKR1B10 in liver cancer ↗

  Oncogene · 2021 · PMID 34140644
  not yet assessed
• Inhibition of STAT3 enhances sensitivity to tamoxifen in tamoxifen-resistant breast cancer cells ↗

  BMC Cancer · 2021 · PMID 34407787
  not yet assessed
• Immune transcriptomes of highly exposed SARS-CoV-2 asymptomatic seropositive versus seronegative individuals from the Ischgl community ↗

  Scientific Reports · 2021 · PMID 33608566
  not yet assessed
• BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ ↗

  Open Biology · 2021 · PMID 34610268
  not yet assessed
• Epigenetic Upregulation of MAGE-A Isoforms Promotes Breast Cancer Cell Aggressiveness ↗

  Cancers · 2021 · PMID 34202157
  not yet assessed
• Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and MCF7 cells ↗

  Scientific Reports · 2021 · PMID 33580144
  not yet assessed
• Functional coordination of BET family proteins underlies altered transcription associated with memory impairment in fragile X syndrome ↗

  Science Advances · 2021 · PMID 34138732
  not yet assessed
• A study of transposable element-associated structural variations (TASVs) using a de novo-assembled Korean genome ↗

  Experimental & Molecular Medicine · 2021 · PMID 33833373
  not yet assessed
• Machine learning based anti-cancer drug response prediction and search for predictor genes using cancer cell line gene expression ↗

  Genomics & Informatics · 2021 · PMID 33840174
  not yet assessed
• Epigenomic Analysis of RAD51 ChIP-seq Data Reveals cis-regulatory Elements Associated with Autophagy in Cancer Cell Lines ↗

  Cancers · 2021 · PMID 34067336
  not yet assessed
• Molecular laterality encodes stress susceptibility in the medial prefrontal cortex ↗

  Molecular Brain · 2021 · PMID 34127022
  not yet assessed
• Identification of Differentially-Methylated Genes and Pathways in Patients with Delayed Cerebral Ischemia Following Subarachnoid Hemorrhage ↗

  Journal of Korean Neurosurgical Society · 2021 · PMID 34320780
  not yet assessed
• Modulation of Human Mesenchymal Stem Cells by Electrical Stimulation Using an Enzymatic Biofuel Cell ↗

  Catalysts · 2021
  not yet assessed
• Tetraarsenic oxide affects non-coding RNA transcriptome through deregulating polycomb complexes in MCF7 cells ↗

  Advances in Biological Regulation · 2021 · PMID 33932728
  not yet assessed
• Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and MCF7 cells ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• MarkerCount: A stable, count-based cell type identifier for single cell RNA-Seq experiments ↗

  Research Square · 2021
  not yet assessed
• MarkerCount: A stable, count-based cell type identifier for single cell RNA-Seq experiments ↗

  Research Square · 2021
  not yet assessed
• BRCA1‐BARD1 complex regulates the stability of topoisomerase IIβ in transcription of human immediate early genes ↗

  The FASEB Journal · 2021
  not yet assessed
• Abstract 2158: Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and mcf7 cells ↗

  Cancer Research · 2021
  not yet assessed
• Supplementary Data 1 from BRCA1-BARD1 regulates transcription through modulating topoisomerase II<i>β</i> ↗

  Figshare · 2021
  not yet assessed
• Predicting commercially available antiviral drugs that may act on the novel coronavirus (SARS-CoV-2) through a drug-target interaction deep learning model ↗

  Computational and Structural Biotechnology Journal · 2020 · PMID 32280433
  not yet assessed
• Integration of transcriptomics, proteomics and metabolomics identifies biomarkers for pulmonary injury by polyhexamethylene guanidine phosphate (PHMG-p), a humidifier disinfectant, in rats ↗

  Archives of Toxicology · 2020 · PMID 32080758
  not yet assessed
• Target-Centered Drug Repurposing Predictions of Human Angiotensin-Converting Enzyme 2 (ACE2) and Transmembrane Protease Serine Subtype 2 (TMPRSS2) Interacting Approved Drugs for Coronavirus Disease 2019 (COVID-19) Treatment through a Drug-Target Interaction Deep Learning Model ↗

  Viruses · 2020 · PMID 33218024
  not yet assessed
• Community Assessment of the Predictability of Cancer Protein and Phosphoprotein Levels from Genomics and Transcriptomics ↗

  Cell Systems · 2020 · PMID 32710834
  not yet assessed
• Nucleoporin 210 Serves a Key Scaffold for SMARCB1 in Liver Cancer ↗

  Cancer Research · 2020 · PMID 33239431
  not yet assessed
• Predicting FOXM1-Mediated Gene Regulation through the Analysis of Genome-Wide FOXM1 Binding Sites in MCF-7, K562, SK-N-SH, GM12878 and ECC-1 Cell Lines ↗

  International Journal of Molecular Sciences · 2020 · PMID 32858881
  not yet assessed
• Genome-wide blood DNA methylation analysis in patients with delayed cerebral ischemia after subarachnoid hemorrhage ↗

  Scientific Reports · 2020 · PMID 32651463
  not yet assessed
• ETS1 Suppresses Tumorigenesis of Human Breast Cancer via Trans-Activation of Canonical Tumor Suppressor Genes ↗

  Frontiers in Oncology · 2020 · PMID 32477936
  not yet assessed
• Tiotropium Is Predicted to Be a Promising Drug for COVID-19 Through Transcriptome-Based Comprehensive Molecular Pathway Analysis ↗

  Viruses · 2020 · PMID 32698440
  not yet assessed
• Genome-Wide Analysis of the DNA Methylation Profile Identifies the Fragile Histidine Triad (FHIT) Gene as a New Promising Biomarker of Crohn’s Disease ↗

  Journal of Clinical Medicine · 2020 · PMID 32375395
  not yet assessed
• Identification of Novel microRNA Prognostic Markers Using Cascaded Wx, a Neural Network-Based Framework, in Lung Adenocarcinoma Patients ↗

  Cancers · 2020 · PMID 32674274
  not yet assessed
• Hormone Receptor-Status Prediction in Breast Cancer Using Gene Expression Profiles and Their Macroscopic Landscape ↗

  Cancers · 2020 · PMID 32380759
  not yet assessed
• Predicting commercially available antiviral drugs that may act on the novel coronavirus (2019-nCoV), Wuhan, China through a drug-target interaction deep learning model ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Immune transcriptomes of highly exposed SARS-CoV-2 asymptomatic seropositive versus seronegative individuals from the Ischgl community ↗

  medRxiv · 2020 · PMID 32908998
  not yet assessed
• Hormone Receptor-status Prediction in Breast Cancer Using Gene Expression Profiles and Their Macroscopic Landscape ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Immune transcriptomes of highly exposed SARS-CoV-2 asymptomatic seropositive versus seronegative individuals from the Ischgl community ↗

  2020 · PMID 32995765
  not yet assessed
• RAD51 May Regulate the Expression of Genes Involved in Autophagy Through Interaction with E-box Binding Proteins in Cancer Cell Lines ↗

  Preprints.org · 2020
  not yet assessed
• Abstract 1896: Whole transcriptome analysis identifies TNS4 as a key effector of cetuximab and a regulator of the oncogenic activity of KRAS mutant colorectal cancer cell lines ↗

  Cancer Research · 2020
  not yet assessed
• BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Modulation of human mesenchymal stem cells by electrical stimulation using an enzymatic biofuel cell ↗

  Research Square · 2020
  not yet assessed
• IFN-γ selectively suppresses a subset of TLR4-activated genes and enhancers to potentiate macrophage activation ↗

  Nature Communications · 2019 · PMID 31346169
  not yet assessed
• MiR-34a and miR-34b/c have distinct effects on the suppression of lung adenocarcinomas ↗

  Experimental & Molecular Medicine · 2019 · PMID 30700696
  not yet assessed
• Aberrantly hypermethylated tumor suppressor genes were identified in oral squamous cell carcinoma (OSCC) ↗

  Clinical Epigenetics · 2019 · PMID 31405379
  not yet assessed
• QKI, a miR‐200 target gene, suppresses epithelial‐to‐mesenchymal transition and tumor growth ↗

  International Journal of Cancer · 2019 · PMID 31026342
  not yet assessed
• Expression of EEF1A1 Is Associated with Prognosis of Patients with Colon Adenocarcinoma ↗

  Journal of Clinical Medicine · 2019 · PMID 31703307
  not yet assessed
• Ets1 suppresses atopic dermatitis by suppressing pathogenic T cell responses ↗

  JCI Insight · 2019 · PMID 30843878
  not yet assessed
• Bcl11b prevents catastrophic autoimmunity by controlling multiple aspects of a regulatory T cell gene expression program ↗

  Science Advances · 2019 · PMID 31457081
  not yet assessed
• Whole Transcriptome Analysis Identifies TNS4 as a Key Effector of Cetuximab and a Regulator of the Oncogenic Activity of KRAS Mutant Colorectal Cancer Cell Lines ↗

  Cells · 2019 · PMID 31409052
  not yet assessed
• Transposable element-mediated structural variation analysis in dog breeds using whole-genome sequencing ↗

  Mammalian Genome · 2019 · PMID 31414176
  not yet assessed
• Wx: a neural network-based feature selection algorithm for transcriptomic data

  Scientific Reports · 2019 · PMID 31324856
  L1 50/100
• P-TEFb Regulates Transcriptional Activation in Non-coding RNA Genes ↗

  Frontiers in Genetics · 2019 · PMID 31068966
  not yet assessed
• Cascaded Wx: A Novel Prognosis-Related Feature Selection Framework in Human Lung Adenocarcinoma Transcriptomes ↗

  Frontiers in Genetics · 2019 · PMID 31379926
  not yet assessed
• Genome-wide analysis of DNA methylation identifies novel differentially methylated regions associated with lipid accumulation improved by ethanol extracts of Allium tubersosum and Capsella bursa-pastoris in a cell model ↗

  PLoS ONE · 2019 · PMID 31170227
  not yet assessed
• Self-Attention Based Molecule Representation for Predicting Drug-Target\n Interaction ↗

  arXiv (Cornell University) · 2019
  not yet assessed
• Self-Attention Based Molecule Representation for Predicting Drug-Target Interaction ↗

  arXiv (Cornell University) · 2019
  not yet assessed
• Erratum to: Flavobacterium parvum sp. nov., isolated from soil polluted by sewer water ↗

  The Journal of Microbiology · 2019 · PMID 31758398
  not yet assessed
• BRCA1-BARD1 Regulates Topoisomerase IIβ&amp;nbsp;Stability in Transcription ↗

  SSRN Electronic Journal · 2019
  not yet assessed
• Additional file 1: of Aberrantly hypermethylated tumor suppressor genes were identified in oral squamous cell carcinoma (OSCC) ↗

  Figshare · 2019
  not yet assessed
• Upregulation of Ets1 expression by NFATc2 and NFKB1/RELA promotes breast cancer cell invasiveness ↗

  Oncogenesis · 2018 · PMID 30467308
  not yet assessed
• Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data

  Nucleic Acids Research · 2018 · PMID 29420797
  L1 68/100
• The transcription factor Foxp1 preserves integrity of an active Foxp3 locus in extrathymic Treg cells ↗

  Nature Communications · 2018 · PMID 30367168
  not yet assessed
• Differentially Expressed Genes in Matched Normal, Cancer, and Lymph Node Metastases Predict Clinical Outcomes in Patients With Breast Cancer ↗

  Applied immunohistochemistry & molecular morphology · 2018 · PMID 32044879
  not yet assessed
• A Simple Guideline to Assess the Characteristics of RNA-Seq Data ↗

  BioMed Research International · 2018 · PMID 30519573
  not yet assessed
• Genetic variations using whole-exome sequencing might predict response for neoadjuvant chemoradiotherapy in locally advanced rectal cancer ↗

  Medical Oncology · 2018 · PMID 30206710
  not yet assessed
• RNA variant identification discrepancy among splice-aware alignment algorithms ↗

  PLoS ONE · 2018 · PMID 30071094
  not yet assessed
• Integrative Bioinformatics and Functional Analyses of GEO, ENCODE, and TCGA Reveal FADD as a Direct Target of the Tumor Suppressor BRCA1 ↗

  International Journal of Molecular Sciences · 2018 · PMID 29757984
  not yet assessed
• Ahniella affigens gen. nov., sp. nov., a gammaproteobacterium isolated from sandy soil near a stream ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · PMID 29923816
  not yet assessed
• Gramella fulva sp. nov., isolated from a dry surface of tidal flat ↗

  The Journal of Microbiology · 2018 · PMID 30456754
  not yet assessed
• Uliginosibacterium sediminicola sp. nov., isolated from freshwater sediment ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · PMID 29458494
  not yet assessed
• A case of interdigitating dendritic cell sarcoma studied by whole-exome sequencing ↗

  Genes & Genomics · 2018 · PMID 30099721
  not yet assessed
• Paludirhabdus telluriireducens gen. nov., sp. nov. and Paludirhabdus pumila sp. nov., isolated from soil of a mountain wetland and emended description of Gorillibacterium massiliense ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · PMID 30067175
  not yet assessed
• Roseomonas fluminis sp. nov. isolated from sediment of a shallow stream ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · PMID 29458474
  not yet assessed
• Type I IFNs and TNF cooperatively reprogram the macrophage epigenome to promote inflammatory activation

  CUNY Academic Works (City University of New York) · 2018
  not yet assessed
• Flavobacterium parvum sp. nov., isolated from soil polluted by sewer water ↗

  The Journal of Microbiology · 2018 · PMID 30047082
  not yet assessed
• TraRECo: a greedy approach based de novo transcriptome assembler with read error correction using consensus matrix ↗

  BMC Genomics · 2018 · PMID 30180798
  not yet assessed
• RNA-seq data of invasive ductal carcinoma and adjacent normal tissues from a Korean patient with breast cancer ↗

  Data in Brief · 2018 · PMID 29900229
  not yet assessed
• IFN-γ selectively suppresses a subset of TLR4-activated genes and enhancers to potentiate M1-like macrophage polarization ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• Type I interferons and the cytokine TNF cooperatively reprogram the macrophage epigenome to promote inflammatory activation ↗

  Nature Immunology · 2017 · PMID 28825701
  not yet assessed
• Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF ↗

  Immunity · 2017 · PMID 28813657
  not yet assessed
• Barrier to autointegration factor 1, procollagen‐lysine, 2‐oxoglutarate 5‐dioxygenase 3, and splicing factor 3b subunit 4 as early‐stage cancer decision markers and drivers of hepatocellular carcinoma ↗

  Hepatology · 2017 · PMID 29059470
  not yet assessed
• The T47D cell line is an ideal experimental model to elucidate the progesterone-specific effects of a luminal A subtype of breast cancer ↗

  Biochemical and Biophysical Research Communications · 2017 · PMID 28342866
  not yet assessed
• Chromatin remodeller Fun30Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation ↗

  Nature Communications · 2017 · PMID 28218250
  not yet assessed
• Combinatorial effects of an epigenetic inhibitor and ionizing radiation contribute to targeted elimination of pancreatic cancer stem cell ↗

  Oncotarget · 2017 · PMID 29179494
  not yet assessed
• Epigenetically altered miR-1247 functions as a tumor suppressor in pancreatic cancer ↗

  Oncotarget · 2017 · PMID 28460450
  not yet assessed
• The 19S proteasome is directly involved in the regulation of heterochromatin spreading in fission yeast ↗

  Journal of Biological Chemistry · 2017 · PMID 28784663
  not yet assessed
• The Ino80 complex mediates epigenetic centromere propagation via active removal of histone H3 ↗

  Nature Communications · 2017 · PMID 28904333
  not yet assessed
• TAp73 inhibits cell invasion and migration by directly activating KAI1 expression in colorectal carcinoma ↗

  Cancer Letters · 2017 · PMID 29222041
  not yet assessed
• Sphingomonas silvisoli sp. nov., isolated from forest soil ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2017 · PMID 28853689
  not yet assessed
• Chthonobacter albigriseus gen. nov., sp. nov., isolated from grass-field soil ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2017 · PMID 28475028
  not yet assessed
• Wx: a neural network-based feature selection algorithm for next-generation sequencing data ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2017
  not yet assessed
• Abstract 1879: Transcriptional regulation of KAI1 by p73 in colorectal cancer metastasis ↗

  Cancer Research · 2017
  not yet assessed
• TraRECo: A Greedy Approach based <i>de novo</i> Transcriptome Assembler with Read Error Correction using Consensus Matrix ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2017
  not yet assessed
• Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil ↗

  Global Biodiversity Information Facility · 2017
  not yet assessed
• Dormant tumor cells expressing LOXL2 acquire a stem-like phenotype mediating their transition to proliferative growth ↗

  Oncotarget · 2016 · PMID 27655685
  not yet assessed
• A Genome-Wide Methylation Approach Identifies a New Hypermethylated Gene Panel in Ulcerative Colitis ↗

  International Journal of Molecular Sciences · 2016 · PMID 27517910
  not yet assessed
• Janus Kinase 1 Is Essential for Inflammatory Cytokine Signaling and Mammary Gland Remodeling ↗

  Molecular and Cellular Biology · 2016 · PMID 27044867
  not yet assessed
• Histone Demethylase KDM6A Controls the Mammary Luminal Lineage through Enzyme-Independent Mechanisms ↗

  Molecular and Cellular Biology · 2016 · PMID 27215382
  not yet assessed
• Sediminibacterium aquarii sp. nov., isolated from sediment in a fishbowl ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2016 · PMID 27498849
  not yet assessed
• Primary cancer cell culture: mammary-optimized vs conditional reprogramming ↗

  Endocrine Related Cancer · 2016 · PMID 27267121
  not yet assessed
• Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream ↗

  The Journal of Microbiology · 2016 · PMID 27225458
  not yet assessed
• Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil ↗

  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2016 · PMID 27902211
  not yet assessed
• Transcriptome analysis of non-small cell lung cancer and genetically matched adjacent normal tissues identifies novel prognostic marker genes ↗

  Genes & Genomics · 2016
  not yet assessed
• Chthonobacter albigriseus gen. nov., sp. nov., Isolated from Grass-field Soil in Korea

  한국미생물학회 학술대회논문집 · 2016
  not yet assessed
• A basal-like breast cancer-specific role for SRF–IL6 in YAP-induced cancer stemness ↗

  Nature Communications · 2015 · PMID 26671411
  not yet assessed
• An autoregulatory enhancer controls mammary-specific STAT5 functions ↗

  Nucleic Acids Research · 2015 · PMID 26446995
  not yet assessed
• Loss of EZH2 results in precocious mammary gland development and activation of STAT5-dependent genes ↗

  Nucleic Acids Research · 2015 · PMID 26250110
  not yet assessed
• Genome-wide target site triplication of Alu elements in the human genome ↗

  Gene · 2015 · PMID 25701601
  not yet assessed
• ETS family protein GABP is a novel co-factor strongly associated with genomic YY1 binding sites in various cell lines ↗

  Genes & Genomics · 2015
  not yet assessed
• The methyltransferases enhancer of zeste homolog (EZH) 1 and EZH2 control hepatocyte homeostasis and regeneration ↗

  The FASEB Journal · 2014 · PMID 25477280
  not yet assessed
• Comparison of tamoxifen and letrozole response in mammary preneoplasia of ER and aromatase overexpressing mice defines an immune-associated gene signature linked to tamoxifen resistance ↗

  Carcinogenesis · 2014 · PMID 25421723
  not yet assessed
• The STAT5-regulated miR-193b locus restrains mammary stem and progenitor cell activity and alveolar differentiation ↗

  Developmental Biology · 2014 · PMID 25236432
  not yet assessed
• MiR-21 Is under Control of STAT5 but Is Dispensable for Mammary Development and Lactation ↗

  PLoS ONE · 2014 · PMID 24497923
  not yet assessed
• Coregulation of Genetic Programs by the Transcription Factors NFIB and STAT5 ↗

  Molecular Endocrinology · 2014 · PMID 24678731
  not yet assessed
• Trp63 is regulated by STAT5 in mammary tissue and subject to differentiation in cancer ↗

  Endocrine Related Cancer · 2014 · PMID 24692510
  not yet assessed
• An automated analysis pipeline for a large set of ChIP-seq data: AutoChIP ↗

  Genes & Genomics · 2014
  not yet assessed
• BLAT-Based Comparative Analysis for Transposable Elements: BLATCAT ↗

  BioMed Research International · 2014 · PMID 24959585
  not yet assessed
• Abstract 3918: Characterizing growth features, allograft generation and transcriptomes of cultured conditionally reprogrammed cells (CRC) prepared from primary triple negative cancer from Brca1-mutant mice ↗

  Cancer Research · 2014
  not yet assessed
• Poster Session : PS 1454 ; Hemato-Oncology(Oncology) : The Methyltransferases EZH1 and EZH2 Control Hepatocyte Homeostasis and Regeneration

  대한내과학회 추계학술발표논문집 · 2014
  not yet assessed
• Comprehensive meta-analysis of Signal Transducers and Activators of Transcription (STAT) genomic binding patterns discerns cell-specific cis-regulatory modules ↗

  BMC Genomics · 2013 · PMID 23324445
  not yet assessed
• Mammary-Specific Gene Activation Is Defined by Progressive Recruitment of STAT5 during Pregnancy and the Establishment of H3K4me3 Marks ↗

  Molecular and Cellular Biology · 2013 · PMID 24277936
  not yet assessed
• <i>MiR-193b</i>and<i>miR-365-1</i>are not required for the development and function of brown fat in the mouse ↗

  RNA Biology · 2013 · PMID 24356587
  not yet assessed
• Human histone H3K79 methyltransferase DOT1L protein binds actively transcribing RNA polymerase II to regulate gene expression. ↗

  Journal of Biological Chemistry · 2013
  not yet assessed
• Human Histone H3K79 Methyltransferase DOT1L Methyltransferase Binds Actively Transcribing RNA Polymerase II to Regulate Gene Expression ↗

  Journal of Biological Chemistry · 2012 · PMID 23012353
  not yet assessed
• Sequential activation of genetic programs in mouse mammary epithelium during pregnancy depends on STAT5A/B concentration ↗

  Nucleic Acids Research · 2012 · PMID 23275557
  not yet assessed
• Hrp3 controls nucleosome positioning to suppress non‐coding transcription in eu‐ and heterochromatin ↗

  The EMBO Journal · 2012 · PMID 22990236
  not yet assessed
• The liver-specific tumor suppressor STAT5 controls expression of the reactive oxygen species-generating enzyme NOX4 and the proapoptotic proteins PUMA and BIM in mice ↗

  Hepatology · 2012 · PMID 22711600
  not yet assessed
• Genome-wide analyses reveal the extent of opportunistic STAT5 binding that does not yield transcriptional activation of neighboring genes ↗

  Nucleic Acids Research · 2012 · PMID 22319210
  not yet assessed
• Retrotransposons as a major source of epigenetic variations in the mammalian genome ↗

  Epigenetics · 2012 · PMID 22415164
  not yet assessed
• The <i>miR‐17/92</i> cluster is targeted by STAT5 but dispensable for mammary development ↗

  genesis · 2012 · PMID 22389215
  not yet assessed
• Genomic and bioinformatics tools to understand the biology of signal transducers and activators of transcription ↗

  Hormone Molecular Biology and Clinical Investigation · 2012 · PMID 25436676
  not yet assessed
• α1‐3/4 fucosylation at Asn 241 of β‐haptoglobin is a novel marker for colon cancer: A combinatorial approach for development of glycan biomarkers ↗

  International Journal of Cancer · 2011 · PMID 21780104
  not yet assessed
• Aebp2 as an Epigenetic Regulator for Neural Crest Cells ↗

  PLoS ONE · 2011 · PMID 21949878
  not yet assessed
• Transcriptional repression of repeat-derived transcripts correlates with histone hypoacetylation at repetitive DNA elements in aged mice brain ↗

  Experimental Gerontology · 2011 · PMID 21782924
  not yet assessed
• Decoding the genome with an integrative analysis tool: Combinatorial CRM Decoder ↗

  Nucleic Acids Research · 2011 · PMID 21724599
  not yet assessed
• Transcriptional changes of secreted Wnt antagonists in hindlimb skeletal muscle during the lifetime of the C57BL/6J mouse ↗

  Mechanisms of Ageing and Development · 2011 · PMID 21855563
  not yet assessed
• (An) integrative analysis tool to identify genome-wide cis-regulatory modules : combinatorial CRM decoder (CCD) = Genome-wide cis-regulatory modules을 찾는 통합적인 분석 프로그램 : Combinatorial CRM decoder (CCD)

  2011
  not yet assessed
• AEBP2 as a potential targeting protein for Polycomb Repression Complex PRC2 ↗

  Nucleic Acids Research · 2009 · PMID 19293275
  not yet assessed
• YY1's role in DNA methylation of Peg3 and Xist ↗

  Nucleic Acids Research · 2009 · PMID 19628663
  not yet assessed
• Evolutionary Conserved Motif Finder (ECMFinder) for genome-wide identification of clustered YY1- and CTCF-binding sites ↗

  Nucleic Acids Research · 2009 · PMID 19208640
  not yet assessed
• RhoB is epigenetically regulated in an age- and tissue-specific manner ↗

  Biochemical and Biophysical Research Communications · 2007 · PMID 17706596
  not yet assessed