Soeren S. Lienkamp

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• Genetic Variants in ARHGEF6 Cause Congenital Anomalies of the Kidneys and Urinary Tract in Humans, Mice, and Frogs.
  2023 L1 85/100

1 assessed by us (1 reproduced) · 83 not yet assessed — every PubMed paper on record, linked below.

• <i>Glomage</i> : A Multimodal Platform for High‐Content Morphological and RNA Profiling of Glomeruli in Zebrafish and Mouse Models ↗

  Advanced Science · 2026
  not yet assessed
• <i>SIX1</i> branchio-oto-renal syndrome variants have different effects on embryonic craniofacial gene expression and cartilage formation ↗

  Development · 2026 · PMID 42290293
  not yet assessed
• SIX1 branchio-oto-renal syndrome variants have different effects on embryonic craniofacial gene expression and cartilage formation ↗

  2026
  not yet assessed
• Pythia: CRISPR-Cas9 gRNA and microhomology repair template design tool ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Pythia: CRISPR-Cas9 gRNA and microhomology repair template design tool ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Precise, predictable genome integrations by deep-learning-assisted design of microhomology-based templates ↗

  Nature Biotechnology · 2025 · PMID 40796977
  not yet assessed
• Recordings on PIEZO1-Overexpressing Oocytes in Microgravity ↗

  Microgravity Science and Technology · 2025
  not yet assessed
• A Novel Strategy for Practical Courses in Human Neuroanatomy ↗

  Annals of Anatomy - Anatomischer Anzeiger · 2025
  not yet assessed
• <i>Glomage</i> : A multimodal platform for high-content morphological and RNA profiling of glomeruli in zebrafish and mouse models ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 41988720
  not yet assessed
• Benchtop mesoSPIM: a next-generation open-source light-sheet microscope for cleared samples ↗

  Nature Communications · 2024 · PMID 38538644
  not yet assessed
• Deletion upstream of MAB21L2 highlights the importance of evolutionarily conserved non-coding sequences for eye development ↗

  Nature Communications · 2024 · PMID 39455595
  not yet assessed
• Evaluating Text-to-Image Generated Photorealistic Images of Human Anatomy ↗

  Cureus · 2024 · PMID 39712811
  not yet assessed
• Immunofluorescence analyses of respiratory epithelial cells aid the diagnosis of nephronophthisis ↗

  Pediatric Nephrology · 2024 · PMID 39098869
  not yet assessed
• Evaluating Text-to-Image Generated Photorealistic Images of Human Anatomy ↗

  medRxiv · 2024
  not yet assessed
• Pythia: Non-random DNA repair allows predictable CRISPR/Cas9 integration and gene editing ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 39386429
  not yet assessed
• Transcriptional Control of Early Nephrogenesis in Xenopus tropicalis ↗

  Journal of the American Society of Nephrology · 2024
  not yet assessed
• Reflective multi-immersion microscope objectives inspired by the Schmidt telescope ↗

  Nature Biotechnology · 2023 · PMID 36997681
  not yet assessed
• SCD5 Regulation by VHL Affects Cell Proliferation and Lipid Homeostasis in ccRCC ↗

  Cells · 2023 · PMID 36980176
  not yet assessed
• A novel role for the chloride intracellular channel protein Clic5 in ciliary function ↗

  Scientific Reports · 2023 · PMID 37848494
  not yet assessed
• Flow induces common and specific transcriptional changes in renal tubular epithelial cells involving the <scp>PI3K</scp> pathway ↗

  The FASEB Journal · 2023 · PMID 38050412
  not yet assessed
• Reflective multi-immersion microscope objectives ↗

  2023
  not yet assessed
• The Benchtop mesoSPIM: a next-generation open-source light-sheet microscope for large cleared samples ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023 · PMID 38168219
  not yet assessed
• Reducing lipid bilayer stress by monounsaturated fatty acids protects renal proximal tubules in diabetes ↗

  eLife · 2022 · PMID 35550039
  not yet assessed
• HNF1B Alters an Evolutionarily Conserved Nephrogenic Program of Target Genes ↗

  Journal of the American Society of Nephrology · 2022 · PMID 36522156
  not yet assessed
• Deep Learning-Assisted Nephrotoxicity Testing with Bioprinted Renal Spheroids ↗

  International Journal of Bioprinting · 2022 · PMID 35702333
  not yet assessed
• Tuning the 3D microenvironment of reprogrammed tubule cells enhances biomimetic modeling of polycystic kidney disease ↗

  Biomaterials · 2022 · PMID 36403325
  not yet assessed
• Genetic Variants in ARHGEF6 Cause Congenital Anomalies of the Kidneys and Urinary Tract in Humans, Mice, and Frogs

  Journal of the American Society of Nephrology · 2022 · PMID 36414417
  L1 85/100
• Kidney Development: Recent Insights from Technological Advances ↗

  Physiology · 2022 · PMID 35253460
  not yet assessed
• Reflective multi-immersion microscope objectives inspired by the Schmidt telescope ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Author response: Reducing lipid bilayer stress by monounsaturated fatty acids protects renal proximal tubules in diabetes ↗

  2022
  not yet assessed
• Deep Learning Allows Automated Analysis of Cystogenesis in Novel Xenopus Animal Models for Autosomal Polycystic Kidney Disease ↗

  Journal of the American Society of Nephrology · 2022
  not yet assessed
• Ttc30a affects tubulin modifications in a model for ciliary chondrodysplasia with polycystic kidney disease ↗

  Proceedings of the National Academy of Sciences · 2021 · PMID 34548398
  not yet assessed
• Scalable fabrication of renal spheroids and nephron-like tubules by bioprinting and controlled self-assembly of epithelial cells ↗

  Biofabrication · 2021 · PMID 33513594
  not yet assessed
• Deep learning is widely applicable to phenotyping embryonic development and disease ↗

  Development · 2021 · PMID 34739029
  not yet assessed
• Specific disruption of calcineurin-signaling in the distal convoluted tubule impacts the transcriptome and proteome, and causes hypomagnesemia and metabolic acidosis ↗

  Kidney International · 2021 · PMID 34252449
  not yet assessed
• Metabolic and Lipidomic Assessment of Kidney Cells Exposed to Nephrotoxic Vancomycin Dosages ↗

  International Journal of Molecular Sciences · 2021 · PMID 34576273
  not yet assessed
• A simulation-based pilot study of crisis checklists in the emergency department ↗

  Internal and Emergency Medicine · 2021 · PMID 33687692
  not yet assessed
• Increasing triacylglycerol formation and lipid storage by unsaturated lipids protects renal proximal tubules in diabetes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• POS-430 CRISPR/CAS9 TARGETING TTTC30A MIMICS CILIARY CHONDRODYSPLASIA WITH POLYCYSTIC KIDNEY DISEASE ↗

  Kidney International Reports · 2021
  not yet assessed
• Comparative Multiple-Species Analysis of Renal Disease Mutations in HNF1B ↗

  Journal of the American Society of Nephrology · 2021
  not yet assessed
• Microenvironmental Influences on 3D Embedded and Bioprinted Induced Renal Tubular Epithelial Cells (iRECs) ↗

  Journal of the American Society of Nephrology · 2021
  not yet assessed
• Scalable fabrication of renal spheroids and nephron-like tubules by bioprinting and controlled self-assembly of epithelial cells

  Open MIND · 2021
  not yet assessed
• Loss of CBY1 results in a ciliopathy characterized by features of Joubert syndrome ↗

  Human Mutation · 2020 · PMID 33131181
  not yet assessed
• Mutations in transcription factor CP2-like 1 may cause a novel syndrome with distal renal tubulopathy in humans ↗

  Nephrology Dialysis Transplantation · 2020 · PMID 33097957
  not yet assessed
• Rare heterozygous GDF6 variants in patients with renal anomalies ↗

  European Journal of Human Genetics · 2020 · PMID 32737436
  not yet assessed
• CRISPR/Cas9 targeting Ttc30a mimics ciliary chondrodysplasia with polycystic kidney disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Molecular Basis for Autosomal-Dominant Renal Fanconi Syndrome Caused by HNF4A ↗

  Cell Reports · 2019 · PMID 31875549
  not yet assessed
• Impact of Diabetic Stress Conditions on Renal Cell Metabolome ↗

  Cells · 2019 · PMID 31554337
  not yet assessed
• Molecular Basis for Autosomal-Dominant Renal Fanconi Syndrome Caused by &lt;i&gt;HNF4A&lt;/i&gt; ↗

  SSRN Electronic Journal · 2019
  not yet assessed
• Fabrication of Kidney Proximal Tubule Grafts Using Biofunctionalized Electrospun Polymer Scaffolds ↗

  Macromolecular Bioscience · 2018 · PMID 30548802
  not yet assessed
• Metabolic characterization of directly reprogrammed renal tubular epithelial cells (iRECs) ↗

  Scientific Reports · 2018 · PMID 29497074
  not yet assessed
• The nucleoside-diphosphate kinase NME3 associates with nephronophthisis proteins and is required for ciliary function during renal development ↗

  Journal of Biological Chemistry · 2018 · PMID 30111592
  not yet assessed
• Direct reprogramming of fibroblasts into renal tubular epithelial cells by defined transcription factors ↗

  Mechanisms of Development · 2017
  not yet assessed
• A Dominant Mutation in Nuclear Receptor Interacting Protein 1 Causes Urinary Tract Malformations via Dysregulation of Retinoic Acid Signaling ↗

  Journal of the American Society of Nephrology · 2017 · PMID 28381549
  not yet assessed
• Toolbox in a tadpole: Xenopus for kidney research ↗

  Cell and Tissue Research · 2017 · PMID 28401306
  not yet assessed
• Engineering kidney cells: reprogramming and directed differentiation to renal tissues ↗

  Cell and Tissue Research · 2017 · PMID 28560692
  not yet assessed
• Direct reprogramming of mouse embryonic fibroblasts into renal tubular epithelial cells (iRECs) ↗

  Protocol Exchange · 2017
  not yet assessed
• Directly reprogrammed renal tubular epithelial cells are sensitive to typical metabolic alterations occurring in hyperglycemia ↗

  2017
  not yet assessed
• 3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation ↗

  Lecture notes in computer science · 2016
  not yet assessed
• Direct reprogramming of fibroblasts into renal tubular epithelial cells by defined transcription factors ↗

  Nature Cell Biology · 2016 · PMID 27820600
  not yet assessed
• Using Xenopus to study genetic kidney diseases ↗

  Seminars in Cell and Developmental Biology · 2016 · PMID 26851624
  not yet assessed
• ETV4 Mutation in a Patient with Congenital Anomalies of the Kidney and Urinary Tract ↗

  International Journal of Pediatrics and Child Health · 2016
  not yet assessed
• 3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation ↗

  arXiv (Cornell University) · 2016
  not yet assessed
• 3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation

  arXiv (Cornell University) · 2016
  not yet assessed
• Mutations in TBX18 Cause Dominant Urinary Tract Malformations via Transcriptional Dysregulation of Ureter Development ↗

  The American Journal of Human Genetics · 2015 · PMID 26235987
  not yet assessed
• Cyclin O (Ccno) functions during deuterosome‐mediated centriole amplification of multiciliated cells ↗

  The EMBO Journal · 2015 · PMID 25712475
  not yet assessed
• The polarity protein Inturned links NPHP4 to Daam1 to control the subapical actin network in multiciliated cells ↗

  The Journal of Cell Biology · 2015 · PMID 26644512
  not yet assessed
• The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin ↗

  Development · 2015 · PMID 25852201
  not yet assessed
• Anks3 interacts with nephronophthisis proteins and is required for normal renal development ↗

  Kidney International · 2015 · PMID 25671767
  not yet assessed
• The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin ↗

  Journal of Cell Science · 2015
  not yet assessed
• The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin ↗

  Development · 2014 · PMID 25516973
  not yet assessed
• Interaction with the Bardet-Biedl Gene Product TRIM32/BBS11 Modifies the Half-life and Localization of Glis2/NPHP7 ↗

  Journal of Biological Chemistry · 2014 · PMID 24500717
  not yet assessed
• Optical flow guided cell segmentation and tracking in developing tissue ↗

  2014
  not yet assessed
• Casein Kinase 1 α Phosphorylates the Wnt Regulator Jade-1 and Modulates Its Activity ↗

  Journal of Biological Chemistry · 2014 · PMID 25100726
  not yet assessed
• ANKS6 is a central component of a nephronophthisis module linking NEK8 to INVS and NPHP3 ↗

  Nature Genetics · 2013 · PMID 23793029
  not yet assessed
• Planar cell polarity (PCP) and Wnt signaling in renal disease ↗

  Drug Discovery Today Disease Mechanisms · 2013
  not yet assessed
• Vertebrate kidney tubules elongate using a planar cell polarity–dependent, rosette-based mechanism of convergent extension ↗

  Nature Genetics · 2012 · PMID 23143599
  not yet assessed
• Inversin, Wnt signaling and primary cilia ↗

  Differentiation · 2011 · PMID 22206729
  not yet assessed
• Inversin relays Frizzled-8 signals to promote proximal pronephros development ↗

  Proceedings of the National Academy of Sciences · 2010 · PMID 21059920
  not yet assessed
• Regulation of ciliary polarity by the APC/C ↗

  Proceedings of the National Academy of Sciences · 2009 · PMID 19805045
  not yet assessed
• Genetic and physical interaction between the NPHP5 and NPHP6 gene products ↗

  Human Molecular Genetics · 2009
  not yet assessed
• Loss of Nephrocystin-3 Function Can Cause Embryonic Lethality, Meckel-Gruber-like Syndrome, Situs Inversus, and Renal-Hepatic-Pancreatic Dysplasia ↗

  The American Journal of Human Genetics · 2008 · PMID 18371931
  not yet assessed
• Genetic and physical interaction between the NPHP5 and NPHP6 gene products ↗

  Human Molecular Genetics · 2008 · PMID 18723859
  not yet assessed
• The C/EBP homologous protein CHOP (GADD153) is an inhibitor of Wnt/TCF signals ↗

  Oncogene · 2006 · PMID 16434966
  not yet assessed