Sabri Boughorbel

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• A curated collection of transcriptome datasets to investigate the molecular mechanisms of immunoglobulin E-mediated atopic diseases.
  2019 L1 62/100

1 assessed by us (0 reproduced) · 120 not yet assessed — every PubMed paper on record, linked below.

• There Is More to Refusal in Large Language Models than a Single Direction ↗

  Open MIND · 2026
  not yet assessed
• There Is More to Refusal in Large Language Models than a Single Direction

  arXiv (Cornell University) · 2026
  not yet assessed
• Advancing open-source visual analytics in digital pathology: A systematic review of tools, trends, and clinical applications ↗

  Journal of Pathology Informatics · 2025 · PMID 40599690
  not yet assessed
• PathVLM-Eval: Evaluation of open vision language models in histopathology ↗

  Journal of Pathology Informatics · 2025 · PMID 40688392
  not yet assessed
• HistoMSC: Density and topology analysis for AI-based visual annotation of histopathology whole slide images ↗

  Computers in Biology and Medicine · 2025 · PMID 40120181
  not yet assessed
• Fanar: An Arabic-Centric Multimodal Generative AI Platform ↗

  arXiv (Cornell University) · 2025
  not yet assessed
• Nudetect: A Point Annotation-Based Framework for Nuclei Detection Using Density Estimation and Conformal Thresholding ↗

  SSRN Electronic Journal · 2025
  not yet assessed
• NuDetect: A Point Annotation-Based Framework for Nuclei Detection Using Density Estimation and Conformal Thresholding ↗

  SSRN Electronic Journal · 2025
  not yet assessed
• Robust object counting through distribution uncertainty matching and optimal transport ↗

  Scientific Reports · 2025 · PMID 40830394
  not yet assessed
• Fasting during Ramadan is associated with changes in activity and blood glucose excursion in people with type 2 diabetes on three or more anti-hyperglycemic agents PROFAST-3 ↗

  Qatar medical journal · 2025 · PMID 40963529
  not yet assessed
• CYFLOD: Cyclic Filtering and Loss Damping for Alleviating Noisy Labels in Fine-Grained Visual Classification ↗

  2025
  not yet assessed
• Beyond the Leaderboard: Understanding Performance Disparities in Large Language Models via Model Diffing ↗

  2025
  not yet assessed
• ArabicWeb-Edu: Educational Quality Data for Arabic LLM Training ↗

  2025
  not yet assessed
• Beyond the Leaderboard: Understanding Performance Disparities in Large Language Models via Model Diffing ↗

  arXiv (Cornell University) · 2025
  not yet assessed
• NuDetect: A point annotation-based framework for nuclei detection using density estimation and conformal thresholding ↗

  Computer Methods and Programs in Biomedicine Update · 2025
  not yet assessed
• Multimodal Large Language Models in Health Care: Applications, Challenges, and Future Outlook ↗

  Journal of Medical Internet Research · 2024 · PMID 39321458
  not yet assessed
• LAraBench: Benchmarking Arabic AI with Large Language Models ↗

  2024
  not yet assessed
• Semantic Ranking for Automated Adversarial Technique Annotation in Security Text ↗

  2024
  not yet assessed
• LLMs for Low Resource Languages in Multilingual, Multimodal and Dialectal Settings ↗

  2024
  not yet assessed
• Temporal self-attention for risk prediction from electronic health records using non-stationary kernel approximation ↗

  Artificial Intelligence in Medicine · 2024 · PMID 38462292
  not yet assessed
• LLMeBench: A Flexible Framework for Accelerating LLMs Benchmarking ↗

  2024
  not yet assessed
• Improving Language Models Trained on Translated Data with Continual Pre-Training and Dictionary Learning Analysis ↗

  2024
  not yet assessed
• Multimodal Large Language Models in Health Care: Applications, Challenges, and Future Outlook (Preprint) ↗

  2024
  not yet assessed
• Semantic Ranking for Automated Adversarial Technique Annotation in Security Text ↗

  arXiv (Cornell University) · 2024
  not yet assessed
• Continual Learning from Simulated Interactions via Multitask Prospective Rehearsal for Bionic Limb Behavior Modeling ↗

  arXiv (Cornell University) · 2024
  not yet assessed
• Improving Language Models Trained on Translated Data with Continual Pre-Training and Dictionary Learning Analysis ↗

  arXiv (Cornell University) · 2024
  not yet assessed
• Analyzing Multilingual Competency of LLMs in Multi-Turn Instruction Following: A Case Study of Arabic ↗

  2023
  not yet assessed
• LAraBench: Benchmarking Arabic AI with Large Language Models ↗

  arXiv (Cornell University) · 2023
  not yet assessed
• LLMeBench: A Flexible Framework for Accelerating LLMs Benchmarking ↗

  arXiv (Cornell University) · 2023
  not yet assessed
• Analyzing Multilingual Competency of LLMs in Multi-Turn Instruction Following: A Case Study of Arabic ↗

  arXiv (Cornell University) · 2023
  not yet assessed
• Multi-Modal Perceiver Language Model for Outcome Prediction in Emergency Department ↗

  arXiv (Cornell University) · 2023
  not yet assessed
• PredictPTB: an interpretable preterm birth prediction model using attention-based recurrent neural networks ↗

  BioData Mining · 2022 · PMID 35164820
  not yet assessed
• Predicting emergency department utilization among children with asthma using deep learning models ↗

  Healthcare Analytics · 2022
  not yet assessed
• Transcriptomic profile investigations highlight a putative role for NUDT16 in sepsis ↗

  Journal of Cellular and Molecular Medicine · 2022 · PMID 35174610
  not yet assessed
• Analysis of risk factors progression of preterm delivery using electronic health records ↗

  BioData Mining · 2022 · PMID 35978434
  not yet assessed
• Applications of Machine Learning for Predicting Heart Failure ↗

  2022
  not yet assessed
• Epidemiology, genetic landscape and classification of childhood diabetes mellitus in the State of Qatar ↗

  Journal of Diabetes Investigation · 2021 · PMID 34101350
  not yet assessed
• SysInflam HuDB, a Web Resource for Mining Human Blood Cells Transcriptomic Data Associated with Systemic Inflammatory Responses to Sepsis ↗

  The Journal of Immunology · 2021 · PMID 34663591
  not yet assessed
• DASSI: differential architecture search for splice identification from DNA sequences ↗

  BioData Mining · 2021 · PMID 33588916
  not yet assessed
• Fairness in TabNet Model by Disentangled Representation for the Prediction of Hospital No-Show ↗

  arXiv (Cornell University) · 2021
  not yet assessed
• PredictPTB: An Interpretable Preterm Birth Prediction Model Using Attention-based Recurrent Neural Networks ↗

  Research Square · 2021
  not yet assessed
• Learning a Shared Model for Motorized Prosthetic Joints to Predict Ankle-Joint Motion ↗

  arXiv (Cornell University) · 2021
  not yet assessed
• Precision medicine in the era of artificial intelligence: implications in chronic disease management ↗

  Journal of Translational Medicine · 2020 · PMID 33298113
  not yet assessed
• Analysis of Risk Factors Progression of Preterm Delivery Using Electronic Health Records ↗

  Research Square · 2020
  not yet assessed
• DASSI: Differential Architecture Search for Splice Identification from DNA Sequences ↗

  Research Square · 2020
  not yet assessed
• Differential Architecture Search in Deep Learning for DNA Splice Site Classification ↗

  Research Square · 2020
  not yet assessed
• In silico analysis of imprinted gene expression in the mouse skin ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• DASSI: Differential Architecture Search for Splice Identification from DNA Sequences ↗

  Research Square · 2020
  not yet assessed
• Long-Chain Acyl-CoA Synthetase 1 Role in Sepsis and Immunity: Perspectives From a Parallel Review of Public Transcriptome Datasets and of the Literature ↗

  Frontiers in Immunology · 2019 · PMID 31681299
  not yet assessed
• Chronic mucocutaneous candidiasis and connective tissue disorder in humans with impaired JNK1-dependent responses to IL-17A/F and TGF-β ↗

  Science Immunology · 2019 · PMID 31784499
  not yet assessed
• Privacy-Preserving Analysis of Distributed Biomedical Data: Designing Efficient and Secure Multiparty Computations Using Distributed Statistical Learning Theory ↗

  JMIR Medical Informatics · 2019 · PMID 31033449
  not yet assessed
• A curated transcriptome dataset collection to investigate the blood transcriptional response to viral respiratory tract infection and vaccination. ↗

  F1000Research · 2019 · PMID 31231515
  not yet assessed
• Interpreting patient-Specific risk prediction using contextual decomposition of BiLSTMs: application to children with asthma ↗

  BMC Medical Informatics and Decision Making · 2019 · PMID 31703676
  not yet assessed
• A curated transcriptome dataset collection to investigate inborn errors of immunity ↗

  F1000Research · 2019 · PMID 31559014
  not yet assessed
• A curated collection of transcriptome datasets to investigate the molecular mechanisms of immunoglobulin E-mediated atopic diseases

  Database · 2019 · PMID 31290545
  L1 62/100
• A curated transcriptome dataset collection to investigate inborn errors of immunity ↗

  F1000Research · 2019
  not yet assessed
• Federated Uncertainty-Aware Learning for Distributed Hospital EHR Data ↗

  arXiv (Cornell University) · 2019
  not yet assessed
• Mapping the Road of Gvhd and GVT: A Longitudinal Study of Immune-Transcriptome Signatures As Novel Approach to Solve Post-Allogeneic Hematopoietic Cell Transplantation Dilemmas ↗

  Blood · 2019
  not yet assessed
• A curated collection of transcriptome datasets to investigate the molecular mechanisms of immunoglobulin E-mediated atopic diseases ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• A curated transcriptome dataset collection to investigate inborn errors of immunity ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Differential Architecture Search in Deep Learning for Genomic Applications ↗

  2019
  not yet assessed
• IRF4 haploinsufficiency in a family with Whipple’s disease ↗

  eLife · 2018 · PMID 29537367
  not yet assessed
• A collection of annotated and harmonized human breast cancer transcriptome datasets, including immunologic classification ↗

  F1000Research · 2018 · PMID 29527288
  not yet assessed
• A step loss function based SVM classifier for binary classification ↗

  Procedia Computer Science · 2018
  not yet assessed
• A Deep Learning Based Automatic Severity Detector for Diabetic Retinopathy ↗

  Lecture notes in computer science · 2018
  not yet assessed
• Automated Classification of Diabetic Retinopathy Severity: A Deep Learning Approach ↗

  2018
  not yet assessed
• On the Depth of Deep Learning Models for Splice Site Identification ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• Author response: IRF4 haploinsufficiency in a family with Whipple’s disease ↗

  2018
  not yet assessed
• Alternating Loss Correction for Preterm-Birth Prediction from EHR Data with Noisy Labels ↗

  arXiv (Cornell University) · 2018
  not yet assessed
• Alternating Loss Correction for Preterm-Birth Prediction from EHR Data\n with Noisy Labels ↗

  arXiv (Cornell University) · 2018
  not yet assessed
• The abundance of Nudix hydrolase 16 transcripts is elevated in human sepsis: perspectives gained during a hands-on reductionist investigation workshop. ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• IgE_GXB_Database ↗

  Figshare · 2018
  not yet assessed
• Optimal classifier for imbalanced data using Matthews Correlation Coefficient metric ↗

  PLoS ONE · 2017 · PMID 28574989
  not yet assessed
• Inherited human IRAK-1 deficiency selectively impairs TLR signaling in fibroblasts ↗

  Proceedings of the National Academy of Sciences · 2017 · PMID 28069966
  not yet assessed
• A collection of annotated and harmonized human breast cancer transcriptome datasets, including immunologic classification ↗

  F1000Research · 2017
  not yet assessed
• The role of alternative Polyadenylation in regulation of rhythmic gene expression ↗

  BMC Genomics · 2017 · PMID 28778154
  not yet assessed
• A curated transcriptomic dataset collection relevant to embryonic development associated with in vitro fertilization in healthy individuals and patients with polycystic ovary syndrome ↗

  F1000Research · 2017 · PMID 28413616
  not yet assessed
• IRF4 haploinsufficiency in a family with Whipple’s disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2017
  not yet assessed
• Additional file 3: of The role of alternative Polyadenylation in regulation of rhythmic gene expression ↗

  Figshare · 2017
  not yet assessed
• Additional file 2: of The role of alternative Polyadenylation in regulation of rhythmic gene expression ↗

  Figshare · 2017
  not yet assessed
• Additional file 1: of The role of alternative Polyadenylation in regulation of rhythmic gene expression ↗

  Figshare · 2017
  not yet assessed
• Additional file 1: of The role of alternative Polyadenylation in regulation of rhythmic gene expression ↗

  Figshare · 2017
  not yet assessed
• Model Comparison for Breast Cancer Prognosis Based on Clinical Data ↗

  PLoS ONE · 2016 · PMID 26771838
  not yet assessed
• A curated compendium of monocyte transcriptome datasets of relevance to human monocyte immunobiology research ↗

  F1000Research · 2016 · PMID 27158452
  not yet assessed
• A curated transcriptome dataset collection to investigate the functional programming of human hematopoietic cells in early life ↗

  F1000Research · 2016 · PMID 27347375
  not yet assessed
• A curated transcriptome dataset collection to investigate the development and differentiation of the human placenta and its associated pathologies ↗

  F1000Research · 2016 · PMID 27303626
  not yet assessed
• 31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two ↗

  Journal for ImmunoTherapy of Cancer · 2016
  not yet assessed
• A curated transcriptome dataset collection to investigate the development and differentiation of the human placenta and its associated pathologies ↗

  F1000Research · 2016
  not yet assessed
• A curated transcriptome dataset collection to investigate the immunobiology of HIV infection ↗

  F1000Research · 2016 · PMID 27134731
  not yet assessed
• A curated transcriptome dataset collection to investigate the development and differentiation of the human placenta and its associated pathologies [version 2; referees: 2 approved]

  F1000Research · 2016
  not yet assessed
• Using Robust Estimation Theory to Design Efficient Secure Multiparty Linear Regression.

  2016
  not yet assessed
• A compendium of monocyte transcriptome datasets to foster biomedical knowledge discovery ↗

  F1000Research · 2016 · PMID 27158451
  not yet assessed
• A Web-Based Systems Immunology Toolkit Allows the Visualization and Analysis of Public Collective Data to Decipher Immunity in Early Life ↗

  Qatar Foundation Annual Research Conference Proceedings Volume 2016 Issue 1 · 2016
  not yet assessed
• Big Data as the Foundation of a Novel Training Platform for Biomedical Researchers in Qatar ↗

  Qatar Foundation Annual Research Conference Proceedings Volume 2016 Issue 1 · 2016
  not yet assessed
• A Web-Based Systems Immunology Toolkit Allowing the Visualization and Comparative Analysis of Publically Available Collective Data to Decipher Immune Regulation in Early Life

  World Academy of Science, Engineering and Technology, International Journal of Bioengineering and Life Sciences · 2016
  not yet assessed
• Raw data for Figure 1 ↗

  Faculty of 1000 Research Ltd · 2016
  not yet assessed
• Variable Importance in Recursive Feature Selection with Random Forests for Mortality Prediction in ICU.

  AMIA · 2015
  not yet assessed
• Pressure-Sensor System for Sleeping-Posture Classification

  2012
  not yet assessed
• Multimodal Sensing System to Enhance the Safety of Infants in the Home Environment

  2012
  not yet assessed
• Child-activity recognition from multi-sensor data ↗

  2010
  not yet assessed
• Baby-Posture Classification from Pressure-Sensor Data ↗

  2010
  not yet assessed
• Eye localization in low and standard definition content with application to face matching ↗

  Computer Vision and Image Understanding · 2009
  not yet assessed
• Online training of object detectors from unlabeled surveillance video ↗

  2008
  not yet assessed
• Accurate eye localization in low and standard definition content ↗

  2008
  not yet assessed
• Comparison of face matching techniques under pose variation ↗

  2007
  not yet assessed
• Performance evaluation of multimedia analysis for surveillance applications

  2007
  not yet assessed
• Person-based search in videos ↗

  2007
  not yet assessed
• The intermediate matching kernel for image local features ↗

  Proceedings. 2005 IEEE International Joint Conference on Neural Networks, 2005. · 2006
  not yet assessed
• Object Predetection Based on Kernel Parametric Distribution Fitting ↗

  2006
  not yet assessed
• Generalized histogram intersection kernel for image recognition ↗

  2005
  not yet assessed
• Conditionally Positive Definite Kernels for SVM Based Image Recognition ↗

  2005
  not yet assessed
• The GCS Kernel for SVM-Based Image Recognition ↗

  Lecture notes in computer science · 2005
  not yet assessed
• The LCCP for Optimizing Kernel Parameters for SVM ↗

  Lecture notes in computer science · 2005
  not yet assessed
• Noyaux pour la classification d'images par les machines à vecteurs de support

  OpenGrey (Institut de l'Information Scientifique et Technique) · 2005
  not yet assessed
• Non-Mercer Kernels for SVM Object Recognition ↗

  2004
  not yet assessed
• New Results - Object Recognition ↗

  2004
  not yet assessed
• New Results - Statistical Learning and Object Detection

  2003
  not yet assessed
• On the choice of similarity measures for image retrieval by example ↗

  2002
  not yet assessed
• New Results - Construction et structuration des espaces de description

  2002
  not yet assessed
• On the choice of similarity measures for image retrieval by example ↗

  Proceedings of the tenth ACM international conference on Multimedia - MULTIMEDIA '02 · 2002
  not yet assessed
• Soft color signatures for image retrieval by content. ↗

  European Society for Fuzzy Logic and Technology Conference · 2001
  not yet assessed