Fredrik Salmén

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• Identification of the stress granule transcriptome via RNA-editing in single cells and <i>in vivo</i>.
  2022 L1 66/100

1 assessed by us (0 reproduced) · 31 not yet assessed — every PubMed paper on record, linked below.

• WNT inhibition primes the transcriptional landscape of mesoderm to initiate a phased ventricular cardiomyocyte specification programme ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Long-term in vitro expansion of a human fetal pancreas stem cell that generates all three pancreatic cell lineages ↗

  Cell · 2024 · PMID 39626658
  not yet assessed
• Detection of histone modifications and full-length transcriptome in single cells identifies sequential epigenetic perceptiveness to lineage commitment ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• High-throughput total RNA sequencing in single cells using VASA-seq ↗

  Nature Biotechnology · 2022 · PMID 35760914
  not yet assessed
• Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo

  Cell Reports Methods · 2022 · PMID 35784648
  L1 66/100
• Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions ↗

  Nature Communications · 2021 · PMID 34650042
  not yet assessed
• Droplet-based Single-cell Total RNA-seq Reveals Differential Non-Coding Expression and Splicing Patterns during Mouse Development ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Identification of the stress granule transcriptome via RNA-editing in single cells and <i>in vivo</i> ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Identification and transfer of spatial transcriptomics signatures for cancer diagnosis ↗

  Breast Cancer Research · 2020 · PMID 31931856
  not yet assessed
• Spatial Deconvolution of HER2-positive Breast Tumors Reveals Novel Intercellular Relationships ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• High-definition spatial transcriptomics for in situ tissue profiling ↗

  Nature Methods · 2019 · PMID 31501547
  not yet assessed
• A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart ↗

  Cell · 2019 · PMID 31835037
  not yet assessed
• High-density spatial transcriptomics arrays for <i>in situ</i> tissue profiling ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• High-definition spatial transcriptomics for in situ tissue profiling

  DSpace@MIT (Massachusetts Institute of Technology) · 2019
  not yet assessed
• Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity ↗

  Nature Communications · 2018 · PMID 29925878
  not yet assessed
• Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections ↗

  Nature Protocols · 2018 · PMID 30353172
  not yet assessed
• Gene expression profiling of periodontitis-affected gingival tissue by spatial transcriptomics ↗

  Scientific Reports · 2018 · PMID 29921943
  not yet assessed
• Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• An Organ-Wide Gene Expression Atlas of the Developing Human Heart ↗

  SSRN Electronic Journal · 2018
  not yet assessed
• New insights into the human heart development using a combined spatial and single-cell transcriptomics approach ↗

  Uppsala University Publications (Uppsala University) · 2018
  not yet assessed
• Spatial Isoform Profiling within Individual Tissue Sections

  2018
  not yet assessed
• Spatially resolved transcriptome profiling in model plant species ↗

  Nature Plants · 2017 · PMID 28481330
  not yet assessed
• ST Pipeline: an automated pipeline for spatial mapping of unique transcripts ↗

  Bioinformatics · 2017 · PMID 28398467
  not yet assessed
• Spatial detection of fetal marker genes expressed at low level in adult human heart tissue ↗

  Scientific Reports · 2017 · PMID 29021611
  not yet assessed
• Correction: Corrigendum: An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries ↗

  Scientific Reports · 2017 · PMID 28287089
  not yet assessed
• Spatially resolved and single cell transcriptomics

  KTH Publication Database DiVA (KTH Royal Institute of Technology) · 2017
  not yet assessed
• 05.16 Transcriptome visualisation of the inflamed rheumatoid arthritis joint ↗

  Annals of the Rheumatic Diseases · 2017
  not yet assessed
• Three-dimensional spatial transcriptomics analysis for classification of breast cancer

  2017
  not yet assessed
• Visualization and analysis of gene expression in tissue sections by spatial transcriptomics ↗

  Science · 2016 · PMID 27365449
  not yet assessed
• An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries ↗

  Scientific Reports · 2016 · PMID 27849009
  not yet assessed
• Massive and parallel expression profiling using microarrayed single-cell sequencing ↗

  Nature Communications · 2016 · PMID 27739429
  not yet assessed
• Spatial Transcriptomics. Digital Pathology to Investigate Intratumor Heterogeneity in Breast Cancer.

  Lund University Publications (Lund University) · 2016
  not yet assessed