Danang Crysnanto

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• Accurate sequence variant genotyping in cattle using variation-aware genome graphs.⚑
  2019 L1 45/100 ⚑

1 assessed by us (0 reproduced) · 56 not yet assessed — every PubMed paper on record, linked below.

• Graph construction method impacts variation representation and analyses in a bovine super-pangenome ↗

  Genome biology · 2023 · PMID 37217946
  not yet assessed
• Structural variation and introgression from wild populations in East Asian cattle genomes confer adaptation to local environment ↗

  Genome biology · 2023 · PMID 37723525
  not yet assessed
• Additional file 2 of Structural variation and introgression from wild populations in East Asian cattle genomes confer adaptation to local environment ↗

  Open MIND · 2023
  not yet assessed
• Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies ↗

  Nature Communications · 2022 · PMID 35641504
  not yet assessed
• 252. Comparison of methods for building pangenome graphs ↗

  2022
  not yet assessed
• Graph construction method impacts variation representation and analyses in a bovine super-pangenome ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Novel functional sequences uncovered through a bovine multiassembly graph ↗

  Proceedings of the National Academy of Sciences · 2021 · PMID 33972446
  not yet assessed
• Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs ↗

  BMC Genomics · 2021 · PMID 33882824
  not yet assessed
• Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Novel functional sequences uncovered through a bovine multi-assembly graph ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Characterization of a haplotype- reference panel for genotyping by low-pass sequencing in Swiss Large White pigs ↗

  Research Square · 2021
  not yet assessed
• Additional file 3 of Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs ↗

  Open MIND · 2021
  not yet assessed
• Additional file 5 of Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs ↗

  Figshare · 2021
  not yet assessed
• Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  BMC Genomics · 2020 · PMID 31914939
  not yet assessed
• Activation of cryptic splicing in bovine WDR19 is associated with reduced semen quality and male fertility ↗

  PLoS Genetics · 2020 · PMID 32407316
  not yet assessed
• Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  Genome biology · 2020 · PMID 32718320
  not yet assessed
• Deletion of porcine <i>BOLL</i> is associated with defective acrosomes and subfertility in Yorkshire boars ↗

  Animal Genetics · 2020 · PMID 32975846
  not yet assessed
• A 63‐bp insertion in exon 2 of the porcine <i>KIF21A</i> gene is associated with arthrogryposis multiplex congenita ↗

  Animal Genetics · 2020 · PMID 32686171
  not yet assessed
• Activation of cryptic splicing in bovine <i>WDR19</i> is associated with reduced semen quality and male fertility ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Deletion of porcine <i>BOLL</i> causes defective acrosomes and subfertility in Yorkshire boars ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Supporting data for Novel functional sequences uncovered through a bovine multi-assembly graph ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• A 63-bp insertion in exon 2 of the porcine <i>KIF21A</i> gene is associated with arthrogryposis multiplex congenita ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Mapping Sequencing Reads to Bovine Breed-Specific Genome Graphs

  2020
  not yet assessed
• Deletion of porcine BOLL causes defective acrosomes and subfertility in Yorkshire boars ↗

  Figshare · 2020
  not yet assessed
• Error upload ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• A 63-bp insertion in exon 2 of the porcine KIF21A gene is associated with arthrogryposis multiplex congenita ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Supporting data for Novel functional sequences uncovered through a bovine multi-assembly graph ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Deletion of porcine BOLL causes defective acrosomes and subfertility in Yorkshire boars ↗

  Figshare · 2020
  not yet assessed
• A 63-bp insertion in exon 2 of the porcine KIF21A gene is associated with arthrogryposis multiplex congenita ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Deletion of porcine BOLL causes defective acrosomes and subfertility in Yorkshire boars ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• MOESM5 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM4 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM11 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM7 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM9 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM10 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM8 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• Additional file 3 of Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  Open MIND · 2020
  not yet assessed
• MOESM12 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• MOESM14 of Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  Figshare · 2020
  not yet assessed
• Accurate sequence variant genotyping in cattle using variation-aware genome graphs⚑

  Genetics Selection Evolution · 2019 · PMID 31092189
  L1 45/100 ⚑
• Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group ↗

  BMC Evolutionary Biology · 2019 · PMID 31068148
  not yet assessed
• Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Data for Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2019
  not yet assessed
• Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Data for Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2019
  not yet assessed
• Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery ↗

  Figshare · 2019
  not yet assessed
• MOESM4 of Accurate sequence variant genotyping in cattle using variation-aware genome graphs ↗

  Figshare · 2019
  not yet assessed
• Additional file 3: of Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group ↗

  Figshare · 2019
  not yet assessed
• Additional file 4: of Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group ↗

  Figshare · 2019
  not yet assessed
• Additional file 1: of Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group ↗

  Figshare · 2019
  not yet assessed
• MOESM5 of Accurate sequence variant genotyping in cattle using variation-aware genome graphs ↗

  Figshare · 2019
  not yet assessed
• Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• Accurate sequence variant genotyping in cattle using variation-aware genome graphs ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• Datasets accompanying the "Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group" ↗

  Figshare · 2018
  not yet assessed
• Encapsulation of dsRNA GIH (Gonad Inhibiting Hormone) Using Chitosan Nanoparticle With Several Physiochemical Optimizations

  2015
  not yet assessed