Jun Zhang

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (2)

• Machine learning developed an intratumor heterogeneity signature for predicting clinical outcome and immunotherapy benefit in bladder cancer.⚑
  2024 L1 40/100 ⚑
• A platelet-related signature for predicting the prognosis and immunotherapy benefit in bladder cancer based on machine learning combinations.⚑
  2024 L1 51/100 ⚑

2 assessed by us (0 reproduced) · 72 not yet assessed — every PubMed paper on record, linked below.

• Discovery of CRISPR-Cas12a clades using a large language model ↗

  Nature Communications · 2025 · PMID 40849498
  not yet assessed
• Engineered Cas12j‐8 is a Versatile Platform for Multiplexed Genome Modulation in Mammalian Cells ↗

  Advanced Science · 2025 · PMID 40492429
  not yet assessed
• Transglutaminase 2 reduces the polyspermy of porcine oocytes by promoting the hardening of zona pellucida ↗

  Theriogenology · 2025 · PMID 39892069
  not yet assessed
• Author Correction: Discovering CRISPR-Cas system with self-processing pre-crRNA capability by foundation models ↗

  Nature Communications · 2025 · PMID 39789054
  not yet assessed
• From iPSCs to myotubes: Identifying potential biomarkers for human FSHD by single‐cell transcriptomics ↗

  Clinical and Translational Medicine · 2025 · PMID 40726336
  not yet assessed
• Mapping the Evolution of Thyroid Ultrasound Research: A 30-year Bibliometric Analysis ↗

  Current Medical Imaging Formerly Current Medical Imaging Reviews · 2025 · PMID 40849785
  not yet assessed
• Zero-shot prediction of mutation effects with multimodal deep representation learning guides protein engineering ↗

  Cell Research · 2024 · PMID 38969803
  not yet assessed
• Ginsenosides retard atherogenesis via remodelling host–microbiome metabolic homeostasis ↗

  British Journal of Pharmacology · 2024 · PMID 38355288
  not yet assessed
• Discovering CRISPR-Cas system with self-processing pre-crRNA capability by foundation models ↗

  Nature Communications · 2024 · PMID 39562558
  not yet assessed
• Conventional and genetic associations of BMI with major vascular and non-vascular disease incidence and mortality in a relatively lean Chinese population: U-shaped relationship revisited ↗

  International Journal of Epidemiology · 2024 · PMID 39385593
  not yet assessed
• Heat-triggered CRISPR/Cas12a microspheres for one-pot assays ↗

  中国科学通报：英文版 · 2024 · PMID 39753473
  not yet assessed
• A PCR-independent approach for mtDNA enrichment and next-generation sequencing: comprehensive evaluation and clinical application ↗

  Journal of Translational Medicine · 2024 · PMID 38664838
  not yet assessed
• Machine learning developed an intratumor heterogeneity signature for predicting clinical outcome and immunotherapy benefit in bladder cancer⚑

  Translational Andrology and Urology · 2024 · PMID 39100839
  L1 40/100 ⚑
• A platelet-related signature for predicting the prognosis and immunotherapy benefit in bladder cancer based on machine learning combinations⚑

  Translational Andrology and Urology · 2024 · PMID 39280688
  L1 51/100 ⚑
• Novel CRISPR-Cas12a Clades Discovery Using Large Language Model ↗

  Research Square · 2024
  not yet assessed
• METTL16 promotes translation and lung tumorigenesis by sequestering cytoplasmic eIF4E2 ↗

  Cell Reports · 2023 · PMID 36840945
  not yet assessed
• Healthy lifestyle, DNA methylation age acceleration, and incident risk of coronary heart disease ↗

  Clinical Epigenetics · 2023 · PMID 36978155
  not yet assessed
• Developing mitochondrial base editors with diverse context compatibility and high fidelity via saturated spacer library ↗

  Nature Communications · 2023 · PMID 37857619
  not yet assessed
• ProRefiner: an entropy-based refining strategy for inverse protein folding with global graph attention ↗

  Nature Communications · 2023 · PMID 37973874
  not yet assessed
• Modeling cross‐talk of RNA modification enzymes reveals tumor microenvironment‐associated clinical significance and immunotherapy prediction in hepatobiliary malignancy ↗

  MedComm · 2023 · PMID 37090117
  not yet assessed
• Correction of a homoplasmic mitochondrial tRNA mutation in patient-derived iPSCs via a mitochondrial base editor ↗

  Communications Biology · 2023 · PMID 37923818
  not yet assessed
• Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning ↗

  Research Square · 2023
  not yet assessed
• Graphene/polyacrylamide interpenetrating structure hydrogels for wastewater treatment ↗

  Research Square · 2023
  not yet assessed
• Data Supplement from Large-Scale Characterization of DNA Methylation Changes in Human Gastric Carcinomas with and without Metastasis ↗

  2023
  not yet assessed
• Data Supplement from Large-Scale Characterization of DNA Methylation Changes in Human Gastric Carcinomas with and without Metastasis ↗

  2023
  not yet assessed
• Raw Data for ProRefiner: An Entropy-based Refining Strategy for Inverse Protein Folding with Global Graph Attention ↗

  Figshare · 2023
  not yet assessed
• MIAOME: Human microbiome affect the host epigenome ↗

  Computational and Structural Biotechnology Journal · 2022 · PMID 35664224
  not yet assessed
• Homeodomain-interacting protein kinase HIPK4 regulates phosphorylation of manchette protein RIMBP3 during spermiogenesis ↗

  Journal of Biological Chemistry · 2022 · PMID 35931115
  not yet assessed
• Comparison of chromatin accessibility landscapes during early development of prefrontal cortex between rhesus macaque and human ↗

  Nature Communications · 2022 · PMID 35794099
  not yet assessed
• Clinical value of fetal facial profile markers during the first trimester ↗

  BMC Pregnancy and Childbirth · 2022 · PMID 36184592
  not yet assessed
• Dynamic Transcriptome Profiling Reveals LncRNA-Centred Regulatory Networks in the Modulation of Pluripotency ↗

  Frontiers in Cell and Developmental Biology · 2022 · PMID 35646895
  not yet assessed
• Activation of α-7 Nicotinic Acetylcholine Receptor Attenuates Cardiac Inflammation Through NLRP3/Caspase-1/IL-18 Pathway ↗

  Biochemical Genetics · 2022 · PMID 34988776
  not yet assessed
• Clinical value of fetal facial profile markers during the first trimester ↗

  Research Square · 2022
  not yet assessed
• Sperm microRNAs confer depression susceptibility to offspring ↗

  Science Advances · 2021 · PMID 33568480
  not yet assessed
• DdCBE mediates efficient and inheritable modifications in mouse mitochondrial genome ↗

  Molecular Therapy — Nucleic Acids · 2021 · PMID 34938607
  not yet assessed
• N6-Methyladenosine RNA Modification in the Tumor Immune Microenvironment: Novel Implications for Immunotherapy ↗

  Frontiers in Immunology · 2021 · PMID 34956201
  not yet assessed
• ZMYND8 preferentially binds phosphorylated EZH2 to promote a PRC2-dependent to -independent function switch in hypoxia-inducible factor–activated cancer ↗

  Proceedings of the National Academy of Sciences · 2021 · PMID 33593912
  not yet assessed
• Decoding m6A mRNA methylation by reader proteins in cancer ↗

  Cancer Letters · 2021 · PMID 34339799
  not yet assessed
• The miR-187 induced bone reconstruction and healing in a mouse model of osteoporosis, and accelerated osteoblastic differentiation of human multipotent stromal cells by targeting BARX2 ↗

  Pathology - Research and Practice · 2021 · PMID 33550149
  not yet assessed
• MRNIP is essential for meiotic progression and spermatogenesis in mice ↗

  Biochemical and Biophysical Research Communications · 2021 · PMID 33689881
  not yet assessed
• 湖羊 PLAG 1基因5'调控区多态性及其与早期体重的关联分析 ↗

  2021
  not yet assessed
• Epitranscriptomics in liver disease: Basic concepts and therapeutic potential ↗

  Journal of Hepatology · 2020 · PMID 32330603
  not yet assessed
• The 18S rRNA m6A methyltransferase METTL5 promotes mouse embryonic stem cell differentiation ↗

  EMBO Reports · 2020 · PMID 32783360
  not yet assessed
• α-ketoglutarate promotes the specialization of primordial germ cell-like cells through regulating epigenetic reprogramming ↗

  Journal of Biomedical Research · 2020 · PMID 32994387
  not yet assessed
• EZH2 cooperates with gain‐of‐function p53 mutants to promote cancer growth and metastasis ↗

  The EMBO Journal · 2019 · PMID 30723117
  not yet assessed
• SPHK1 deficiency protects mice from acetaminophen-induced ER stress and mitochondrial permeability transition ↗

  Cell Death and Differentiation · 2019 · PMID 31827236
  not yet assessed
• Myotubularin related protein 7 is essential for the spermatogonial stem cell homeostasis via PI3K/AKT signaling ↗

  Cell Cycle · 2019 · PMID 31478454
  not yet assessed
• Differential roles of Stella in the modulation of DNA methylation during oocyte and zygotic development ↗

  Cell Discovery · 2019 · PMID 30701082
  not yet assessed
• Precursor RNA processing 3 is required for male fertility, and germline stem cell self-renewal and differentiation via regulating spliceosome function in Drosophila testes ↗

  Scientific Reports · 2019 · PMID 31292463
  not yet assessed
• The Protein Phosphorylation Landscape of Mouse Spermatids during Spermiogenesis ↗

  PROTEOMICS · 2019 · PMID 30901149
  not yet assessed
• Effect of TET2 on the pathogenesis of diabetic nephropathy through activation of transforming growth factor β1 expression via DNA demethylation ↗

  Life Sciences · 2018 · PMID 29705354
  not yet assessed
• DNMT1 mediated promoter methylation of GNAO1 in hepatoma carcinoma cells ↗

  Gene · 2018 · PMID 29709639
  not yet assessed
• DNA methylation at the vicinity of the proximal polyadenylation site in FANCD2 gene involves human malignancy ↗

  Cell Cycle · 2018 · PMID 30176149
  not yet assessed
• EZH2 co-opts gain-of-function p53 mutants to promote cancer growth and metastasis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• 二回転ヘッド5軸工作機械のための工具の迅速動力学予測【Powered by NICT】

  Precision Engineering · 2017
  not yet assessed
• Fine-Mapping of ABO Gene Identifies Two Novel SNPs Associated with Large Artery Atherosclerotic Stroke in a Chinese Han Population ↗

  Molecular Neurobiology · 2016 · PMID 26924317
  not yet assessed
• Association between the single nucleotide polymorphism of RASSF1A Ala133Ser and colorectal cancer in north Chinese Han population

  Jiefangjun yixue zazhi · 2015
  not yet assessed
• Exosomes mediate drug resistance transfer in MCF-7 breast cancer cells and a probable mechanism is delivery of P-glycoprotein ↗

  Tumor Biology · 2014 · PMID 25077924
  not yet assessed
• Genetic Dissection of Tie Pathway in Mouse Lymphatic Maturation and Valve Development ↗

  Arteriosclerosis Thrombosis and Vascular Biology · 2014 · PMID 24764452
  not yet assessed
• Programming and Inheritance of Parental DNA Methylomes in Mammals ↗

  Cell · 2014
  not yet assessed
• Repeated febrile convulsions impair hippocampal neurons and cause synaptic damage in immature rats: neuroprotective effect of fructose-1,6-diphosphate ↗

  Neural Regeneration Research · 2014 · PMID 25206915
  not yet assessed
• Abstract 4012: Large-scale characterization of DNA methylation changes in human gastric carcinomas with and without metastasis ↗

  Cancer Research · 2014
  not yet assessed
• Sperm, but Not Oocyte, DNA Methylome Is Inherited by Zebrafish Early Embryos ↗

  Cell · 2013 · PMID 23663777
  not yet assessed
• The Heat-Induced Reversible Change in the Blood-Testis Barrier (BTB) Is Regulated by the Androgen Receptor (AR) via the Partitioning-Defective Protein (Par) Polarity Complex in the Mouse1 ↗

  Biology of Reproduction · 2013 · PMID 23759306
  not yet assessed
• Dnmt3a regulates both proliferation and differentiation of mouse neural stem cells ↗

  Journal of Neuroscience Research · 2012 · PMID 22714992
  not yet assessed
• Excitatory effect of histamine on rat spinal motoneurons by activation of both H₁ and H₂ receptors in vitro ↗

  Journal of Neuroscience Research · 2011 · PMID 21922515
  not yet assessed
• Endothelial Cell Capture of Heparin-Binding Growth Factors under Flow ↗

  PLoS Computational Biology · 2010 · PMID 21060855
  not yet assessed
• Multigrid Finite Volume Method for FGF-2 Transport and Binding ↗

  Lecture notes in electrical engineering · 2010
  not yet assessed
• Histamine excites rat lateral vestibular nuclear neurons through activation of post-synaptic H2 receptors ↗

  Neuroscience Letters · 2008 · PMID 18938221
  not yet assessed
• CeRh1 ( <i>rhr-1</i> ) is a dominant Rhesus gene essential for embryonic development and hypodermal function in <i>Caenorhabditis elegans</i> ↗

  Proceedings of the National Academy of Sciences · 2006 · PMID 16595629
  not yet assessed
• In vitro and in vivo osteogenetic effects of hyaluronic acid mixed with BMP-2 gene transfected bone marrow derived mesenchymal stem cells

  Zhonghua shiyan waike zazhi · 2004
  not yet assessed
• Quantitative analysis of tumor-derived methylated p16INK4a sequences in plasma, serum, and blood cells of hepatocellular carcinoma patients. ↗

  PubMed · 2003 · PMID 12631605
  not yet assessed
• The Cell Adhesion Molecule Retina Cognin Is a Cell Surface Protein Disulfide Isomerase That Uses Disulfide Exchange Activity to Modulate Cell Adhesion ↗

  Experimental Cell Research · 2000 · PMID 10912786
  not yet assessed
• Developmental localization of retina cognin synthesis by in situ hybridization ↗

  Developmental Brain Research · 1997 · PMID 9466717
  not yet assessed