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Provenance — who produced it, who reused it
Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
3 further papers cite this accession but reuse could not be confirmed.
Deep data QC
70/100 · CStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
wastewater metagenome
Instrument
Illumina HiSeq 3000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads), submitted files
N numbers (samples, groups)
250 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
1590983824299
reported
total reads
5782014789
reported
n content pct
0.012
measured
pct q20 bases
93
measured
pct q30 bases
87.7
measured
gc content pct
47.6
measured
mean read length
151
measured
mean base quality
37.1
measured
adapter content pct
10.42
measured
duplication rate pct
19.29
measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 70/100
The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
87.7
measured
×1
89%
duplication rate pct
19.29
measured
×0.5
65%
adapter content pct
10.42
measured
×0.4
33%
QC cost
10 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0