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Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
99/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
human gut metagenome
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads), submitted files
N numbers (samples, groups)
234 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
2892349805336
reported
total reads
16227442917
reported
n content pct
1.059
measured
pct q20 bases
97.3
measured
pct q30 bases
89.8
measured
gc content pct
42.8
measured
mean read length
77.7
measured
mean base quality
34.6
measured
adapter content pct
0
measured
duplication rate pct
0.84
measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 99/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
89.8
measured
×1
99%
duplication rate pct
0.84
measured
×0.5
100%
adapter content pct
0
measured
×0.4
100%
QC cost
20 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0