ERR1172420

ENA

Provenance — who produced it, who reused it

Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

No linked papers found in the corpus yet.

Deep data QC

69/100 · D

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: reported

Data type / assay

bulk-RNA-seq

Organism

Homo sapiens

Instrument

PacBio RS II

Platform

PACBIO_SMRT

Files available

FASTQ

Metrics (value · how obtained)

base count 3559922 reported

read count 3882 reported

parent study PRJEB11818 reported

library layout SINGLE reported

read length bp 917 extrapolated

library strategy OTHER reported

checksums present yes reported

How this grade was computed

Weighted mean of 6 scored metric(s) → 69/100

The D grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

raw data available reported ×1.4 100%

depth reported ×1.2 0%

read length reported ×0.8 100%

layout paired reported ×0.6 40%

integrity verifiable reported ×0.6 100%

instrument declared reported ×0.4 100%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-meta-1.0 · provisional — verify independently