ERR1725020

ENA

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

69/100 · D

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: reported

Data type / assay

bulk-RNA-seq

Organism

Suid herpesvirus 1 strain Kaplan

Instrument

PacBio RS II

Platform

PACBIO_SMRT

Files available

FASTQ

Metrics (value · how obtained)

base count 95556374 reported

read count 74928 reported

parent study PRJEB17709 reported

library layout SINGLE reported

read length bp 1275.3 extrapolated

library strategy RNA-Seq reported

checksums present yes reported

How this grade was computed

Weighted mean of 6 scored metric(s) → 69/100

The D grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

raw data available reported ×1.4 100%

depth reported ×1.2 0%

read length reported ×0.8 100%

layout paired reported ×0.6 40%

integrity verifiable reported ×0.6 100%

instrument declared reported ×0.4 100%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-meta-1.0 · provisional — verify independently