Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE100328

GEO first seen 2018

KMT2C medaites the estrogen dependence of breast cancer through regulation of ERα enhancer function

Organism
Homo sapiens
Samples
47
Type
Expression profiling by high...
Submitted
2017-06-21

KMT2C is a key regulator of ERα activity whose loss allows for hormone independent proliferation in MCF7 cells

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Kinisha GalaSarat Chandarlapaty
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
ChIP-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 2500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
47 / 47 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 195885085902 reported
total reads 2103576558 reported
supplementary file types BIGWIG, BW, PNG, TXT reported
QC cost 6 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently