Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE101082

GEO first seen 2019

Effect of CXCR4 knockdown in CAFs on gene expression

Organism
Homo sapiens
Samples
4
Type
Expression profiling by arra...
Submitted
2017-07-10

Cancer associated fibroblasts were used for siRNA mediated knockdown of CXCR4. Control and knockdown CAFs were used to generate RNA and cDNA that was used for gene expression analysis

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Kith Pradhan
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 2 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently