RNA-seq of regenerating blastema cells in Drosophila melanogaster
We have carried out eukaryotic whole-genome Illumina RNA-seq of regenerating blastema cells and control undamaged wing imaginal disc cells to identify the differentially expressed genes during regeneration.
Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Drosophila melanogaster bulk RNA-seq via HiSeq 2000 spanning ~17.8 billion bases across 178 million reads with 96.7% Q20 bases—suited for genome-wide gene expression profiling, isoform discovery, and developmental transcriptomics. High Q30 (90.9%) and minimal N-content (0.022%) support splice junction detection and recovery of low-abundance transcripts in this model organism.
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0