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GSE103163

GEO first seen 2021

Identification of quiescence and early activation histones modifications pattern in satellite cells

Organism
Mus musculus
Samples
16
Type
Genome binding/occupancy pro...
Submitted
2017-08-28

We report that the current stem cell isolation procedures induce important transcriptional and epigenetic modifications. Focusing on adult skeletal muscle stem cells (MuSCs), here we report the epigenome (Histone 3 modifications by ChIP-sequencing) of true quiescent MuSCs and compare it to early-activated MuSCs isolated by the conventional method.

Provenance — who produced it, who reused it

Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Léo MachadoJoana Esteves de LimaOdile FabreCaroline ProuxRachel LegendreAnikó SzegediHugo VaretLars IngerslevRomain BarrèsFrédéric RelaixPhilippos Mourikis
Reused by

2 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 24 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently