Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE103354

GEO first seen 2018

A revised airway epithelial hierarchy includes CFTR-expressing ionocytes

Organism
Mus musculus
Samples
325
Type
Expression profiling by high...
Submitted
2017-08-31

Airways conduct gases to the lung and are disease sites of asthma and cystic fibrosis. Here we study the cellular composition and hierarchy of the mouse tracheal epithelium by single-cell RNA-sequencing (scRNA-seq) and in vivo lineage tracing. We identify a rare cell type, the Foxi1+ pulmonary ionocyte; functional variations in club cells by proximodistal location; a distinct cell type in high turnover squamous epithelial structures that we term 'hillocks'; and disease-relevant subsets of tuft a...

Provenance — who produced it, who reused it

Linked to 6 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Daniel T MontoroAdam L HaberMoshe BitonVladimir VinarskySijia ChenJorge VilloriaNoga RogelPurushothama Rao TataSteven M RoweJohn F EngelhardtAviv RegevJayaraj RajagopalBrian LinSusan BirketFeng YuanHui Min LeungGrace BurginAlexander TsankovAvinash WaghrayMichal SlyperJulia WaldmanLan NguyenDanielle DionneOrit Rozenblatt-RosenHongmei MouManjunatha ShivarajuHerman BihlerMartin MenseGuillermo Tearney
Reused by

4 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently