Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE104686

GEO first seen 2018

N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications.

Organism
Mus musculus
Samples
35
Type
Expression profiling by high...
Submitted
2017-10-06

Internal N6-methyladenosine (m6A) modification is widespread in messenger RNAs(mRNAs) and catalyzed by heterodimers of methyltransferase-like protein 3 (Mettl3) andMettl14. To understand the role of m6A in development, we deleted Mettl14 in embryonicneural stem cells (NSCs) in a mouse model. Phenotypically, NSCs lacking Mettl14 displaymarkedly decreased proliferation and premature differentiation, suggesting m6Amodification enhances NSC self-renewal. Decreased NSC pool led to decreased numberlat...

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Yang WangJing C Zhao
Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
ChIP-seq
Organism
Mus musculus
Instrument
Illumina Genome Analyzer
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
35 / 35 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 71098683559 reported
total reads 944734117 reported
supplementary file types BROADPEAK, GTF, TXT reported
QC cost 9 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently