Corpus 1,273 assessed · 1,174 scored · 643 reproduced ≥75 · 169 flagged ·∅ 74.1/100
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GSE106118

GEO first seen 2022

Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart

Organism
Homo sapiens
Samples
98
Type
Expression profiling by high...
Submitted
2017-10-24

The heart is the central organ of the circulatory system, and its proper development is vital for maintaining human life. Here we used single-cell RNA-sequencing to profile the gene expression landscapes of ~4,000 cardiac cells from human embryos and identified four major types of cells: cardiomyocytes (CMs), cardiac fibroblasts, endothelial cells (EC) and valvar interstitial cells (VICs). During heart development, atrial and ventricular CMs acquired distinct features early in development. Furth...

Provenance — who produced it, who reused it

Linked to 14 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Yueli CuiYuxuan ZhengXixi LiuLiying YanXiaoying FanJun YongYuqiong HuJi DongQingqing LiXinglong WuShuai GaoJingyun LiLu WenJie QiaoFuchou Tang
Reused by

11 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 4000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
98 / 98 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 2723320901952 reported
total reads 9116546244 reported
supplementary file types TXT reported
QC cost 5 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently