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Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue
Analysis of 143 completely histologically-normal breast tissues resulted in the identification of a “malignancy risk” gene signature that may serve as a marker of subsequent risk of breast cancer development.
Provenance — who produced it, who reused it
Linked to 47 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Dung-Tsa ChenWilliam J FulpR V Chinnambally
Reused by
- Separate enrichment analysis of pathways for up- and downregulat... 2013 · 216 cites
- Actin stress fiber organization promotes cell stiffening and pro... 2017 · 182 cites
- DTL promotes cancer progression by PDCD4 ubiquitin-dependent deg... 2019 · 143 cites
- <scp>FAM</scp>83 family oncogenes are broadly involved in human... 2017 · 128 cites
- Portraying breast cancers with long noncoding RNAs 2016 · 116 cites
- FAM83D promotes cell proliferation and motility by downregulatin... 2013 · 108 cites
- The Lineage Determining Factor GRHL2 Collaborates with FOXA1 to... 2019 · 92 cites
- RegPhos 2.0: an updated resource to explore protein kinase–subst... 2014 · 86 cites
- High-throughput identification of reference genes for research a... 2013 · 82 cites
- Downregulation of the FTO m6A RNA demethylase promotes EMT-media... 2021 · 78 cites
- CrossNorm: a novel normalization strategy for microarray data in... 2016 · 76 cites
36 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types
CEL
reported
QC cost
10 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently