Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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GSE109281

GEO first seen 2019

Subclonal cooperation drives metastasis through modulating local and systemic immune microenvironments

Organism
Homo sapiens; Mus musculus
Samples
121
Type
Expression profiling by high...
Submitted
2018-01-17

Bulk RNA-Seq: Gene expression analysis of stromal and tumor fractions of primary and metastatic lesions of polyclonal and monoclonal origin. Primary tumor control samples consist of monoclonal Thy1.1 (no replicates), monoclonal parental (no replicates), monoclonal IL11 (duplicate), monoclonal FIGF (duplicate), and monoclonal CFP (duplicate). Primary polyclonal tumor samples consist of separated Thy 1.1 (duplicate), CFP (no replicates), IL11 (triplicate), and FIGF (triplicate). Metastatic tumor s...

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Michalina JaniszewskaDoris P TabassumZafira CastranoSimona CristeaKimiyo N YamamotoNatalie L KingstonKatherine C MurphyShaokun ShuNicholas W HarperCarlos Gil Del AlcazarMaša AlečkovićMuhammad EkramOfir CohenMinsuk KwakYuanbo QinTyler LaszewskiAdrienne LuomaAndriy MarusykKai W WucherpfennigNikhil WagleRong FanFranziska MichorSandra McAllisterKornelia Polyak
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently