GSE109381

DNA methylation-based classification of human central nervous system tumors

Organism

Homo sapiens

Samples

3,905

Type

Methylation profiling by gen...

Submitted

2018-01-18

This SuperSeries is composed of the SubSeries listed below.

Provenance — who produced it, who reused it

Linked to 20 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by

DNA methylation-based classification of central nervous system t... 2018

Reused by

Conumee 2.0: enhanced copy-number variation analysis from DNA me... 2024 · 112 cites
OmiEmbed: A Unified Multi-Task Deep Learning Framework for Multi... 2021 · 109 cites
Comparative Molecular Life History of Spontaneous Canine and Hum... 2020 · 103 cites

16 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay

methylation

Organism

Homo sapiens

Files available

IDAT

Metrics (value · how obtained)

supplementary file types IDAT reported

QC cost 2 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently