Single-Cell Transcriptomes Distinguish Stem Cell State Changes and Lineage Specification Programs in Early Mammary Gland Development
Single cell analysis of the mouse mammary gland from embryonic to adult stages using 10X Chromium platform.
Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Single-Cell Chromatin Analysis of Mammary Gland Development Reve... 2019 · 110 cites
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Mouse bulk RNA-seq. Grade A. Exceptional measured quality across all metrics: Q30 97.7%, base quality 39, and exceptionally low duplication (9.28%); these metrics ensure reliable base calls and unbiased abundance estimates. Excellent for reuse in expression and variant studies.
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.