GSE112085

GEO first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

riboCIRC: a comprehensive database of translatable circRNAs 2021 · 82 cites

Deep data QC

93/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

Bulk RNA-seq of Homo sapiens with unavailable instrument information (HTTP fetch error), but exceptionally high base quality metrics (96.3% Q30, 125 bp mean length, 36.9 mean Q score). This dataset supports robust human gene expression studies despite missing platform details. Researchers should contact GEO to obtain complete sequencing instrument and library preparation information.

Data type / assay

bulk-RNA-seq

Organism

Homo sapiens

Metrics (value · how obtained)

n content pct 0.015 measured

pct q20 bases 98.2 measured

pct q30 bases 96.3 measured

gc content pct 46.7 measured

mean read length 125 measured

mean base quality 36.9 measured

adapter content pct 9.25 measured

duplication rate pct 21.03 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 93/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96.3 measured ×1 100%

mean base quality 36.9 measured ×0.6 100%

adapter content pct 9.25 measured ×0.4 60%

duplication rate pct 21.03 measured ×0.4 100%

QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0