Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE11348

GEO first seen 2012

Gene expression profiles during in vivo human rhinovirus infection: insights into the host response.

Organism
Homo sapiens
Samples
93
Type
Expression profiling by arra...
Submitted
2008-05-05

RATIONALE: Human rhinovirus infections cause colds and trigger exacerbations of lower airway diseases. OBJECTIVES: To define changes in gene expression profiles during in vivo rhinovirus infections. METHODS: Nasal epithelial scrapings were obtained before and during experimental rhinovirus infection, and gene expression was evaluated by microarray. Naturally acquired rhinovirus infections, cultured human epithelial cells, and short interfering RNA knockdown were used to further evaluate the role...

Provenance — who produced it, who reused it

Linked to 4 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
David ProudRonald B TurnerBirgit WintherShahina WiehlerJay P TiesmanTim D ReichlingKenton D JuhlinAndy W FulmerBegonia Y HoAmy A WalanskiCathy L PooreHaruko MizoguchiLynn JumpMarsha L MooreClaudine K ZukowskiJeffrey W Clymer
Reused by

2 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL, CHP
Metrics (value · how obtained)
supplementary file types CEL, CHP reported
QC cost 5 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently