← Dataset search
Molecular, Spatial and Functional Single-Cell Profiling of the Hypothalamic Preoptic Region
Single-cell RNA sequencing of ~31,000 cells dissociated and captured from the preoptic region of the hypothalamus from multiple male and female mice
Provenance — who produced it, who reused it
Linked to 12 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Xiaowei ZhuangCatherine Dulac
Reused by
- HypoMap—a unified single-cell gene expression atlas of the murin... 2022 · 260 cites
- Gene regulation by gonadal hormone receptors underlies brain sex... 2022 · 232 cites
- stPlus: a reference-based method for the accurate enhancement of... 2021 · 116 cites
- A unified computational framework for single-cell data integrati... 2022 · 103 cites
- De novo analysis of bulk RNA-seq data at spatially resolved sing... 2022 · 95 cites
6 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Instrument
NextSeq 500
Platform
ILLUMINA
Read type
short-read
Files available
BAM/CRAM (aligned)
N numbers (samples, groups)
6 / 6 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
no
reported
total bases
295163144824
reported
total reads
2202710036
reported
supplementary file types
MTX, TSV
reported
QC cost
6 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently